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The map label for this gene is yvfS [H]

Identifier: 116516402

GI number: 116516402

Start: 1793992

End: 1794729

Strand: Reverse

Name: yvfS [H]

Synonym: SPD_1800

Alternate gene names: 116516402

Gene position: 1794729-1793992 (Counterclockwise)

Preceding gene: 116516186

Following gene: 116515432

Centisome position: 87.71

GC content: 39.43

Gene sequence:

>738_bases
ATGAAACGATGGATAGCACTTAGTAAGATAGAATTTTTATTGACCAAACGACAATTAATCTATTATCTATTGTCGGTAGG
GATGCCGACGGCTTTCTATTTATTTTTTTCTGGTATCTATCAGGACACACCAGGTGAACTCGCGAATTTTATGCGTGATT
ATCTTATCTCCATGACTGCATTTTCCATGATGTCAACAGCTATCTTCTCATTCCCAGTTGTTTTACATACCGACAAGATC
AACAACTGGCAGAAAACATTGCGTCATAGCCCTGTAAATATGGTAGAATATTATCTATCAAAGATAACAAGTATGCTGGT
TGATTATTTGGTTTCAATCTTGGTGGTTTTCTCAGTTGGGCATTTTGTAAGAGGTGTGGACATGTCTCTTGGAAATTGGA
TTGGGGCTGCACTTTTGCTGATAGTAGGAAGTATTGCCTTCGTAGCGCTTGGTTTGACCTTGACTCTCTTACCAACTAGT
CAGTTGATGTCTGTCGTGGGCAATCTTCTTTATCTAGGGTTGGCTGTTTTAGGTGGACTCTGGATGCCTATCTCTTTATT
TCCAGACTGGATGCAAGTAGTAGGTAAGTGTCTCCCGACCTATCAGTTGATGGAGTTGCTCAAGACCTTCTTAAATGAGG
GTGGCATCAATCTATCAGCCACAGTTTATTTACTTGTTTTTTCAGTAGTTTTGTTTGGTTTGACCATTTACCTTCAAGGT
CATAAGGAGAATGCTTAA

Upstream 100 bases:

>100_bases
CTATTAGCCCAAGCAGGATGTAGGATGCAAGAAATCGAAGTTAATAATCGTAGTTTGTTGAATACAATCTTTGAAGAGAC
GCAGAAGGGAGATAACTAAG

Downstream 100 bases:

>100_bases
TGCTTGAAAGACTGAAAAGCATACATTATATGTTTTGGATCAGTTTAATTTTTATGGTTTTCCCCATCCTAACTGTAGTG
ACTGGGTGGCTTTCTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTAFSMMSTAIFSFPVVLHTDKI
NNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVGHFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
HKENA

Sequences:

>Translated_245_residues
MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTAFSMMSTAIFSFPVVLHTDKI
NNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVGHFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
HKENA
>Mature_245_residues
MKRWIALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGIYQDTPGELANFMRDYLISMTAFSMMSTAIFSFPVVLHTDKI
NNWQKTLRHSPVNMVEYYLSKITSMLVDYLVSILVVFSVGHFVRGVDMSLGNWIGAALLLIVGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPISLFPDWMQVVGKCLPTYQLMELLKTFLNEGGINLSATVYLLVFSVVLFGLTIYLQG
HKENA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27467; Mature: 27467

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]