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The map label for this gene is rgg [H]

Identifier: 116516388

GI number: 116516388

Start: 948318

End: 949172

Strand: Reverse

Name: rgg [H]

Synonym: SPD_0939

Alternate gene names: 116516388

Gene position: 949172-948318 (Counterclockwise)

Preceding gene: 116517015

Following gene: 116515386

Centisome position: 46.39

GC content: 29.94

Gene sequence:

>855_bases
ATGAAATCAAAACTTGGTGTCACACTTAGAAAAATTCGTAAGGGCAAACAAATTAGTCTATGTTCTGTAGCTGATGAGCA
TCTTTCAAAATCGCAAATCTCTCGTTTTGAACGTGGGGAATCAGAAATATCTTGTATTCGACTGATCAATATTTTAGACA
AATTACACATTACGTTAGATGAGTTTCTTATTTTACACGATGAAGACTATACCAAAACTGAGTCTTTTGCTAACTTAGTA
CAGTATATCCGTAAACAATATTCATCACAAAGTATCAATAATATAGCATGTCTACTTTCTGATACTTCTGATTACACTCT
AAATTCTTTTGAGAAAACAATGGTAAAATCTATTTTACACACAATGGATTCGAACATCATTCCATCAGATGAAGAGCTTC
TTCATCTGACAGACTATCTTTTCAAAATTGAAAAATGGGGCTATTATGAAATCATTTTATTAGGTAACTGTGTACGCACA
ATTAACTACAACTCCTACTTCTTATTAACTAAAGAGATGTTAAATAACTATATTTACTCATCTCTGAATAAAACTAATAA
GCAGATTGTCTCTCAGCTTGCTATTAATTGCTTCATTCTAAGCATTGATAAGGAAGAATTTTCTAATTGCTCCTATTTAA
TTAGTAAGATAAAGACATTGTTGGATAATGAACTAAACTTTTATGAACAAACAGTTTTTCTCTATGCAACTGGTTACTTT
GAATTTAAACGTTGCCAATCAACCAGTGGAATTGAAAAAATGAAACAAGCCATACAAGTCTTCGATATTTTAGGAGAAAA
TAAGTTAAAATTACACTATACTGACCATTTTAATAAACCAGTAAACAAAAAATAA

Upstream 100 bases:

>100_bases
AATTTTGAAATTTTCTTCATACTCTGACTTCCTTTCATTTTTTATTTATTGTACAATAAATAAGAAATAAGTTAATTTTT
GTTGGGAAAATGGGAAAACT

Downstream 100 bases:

>100_bases
ATGAAATTATTCTCTATCTTTTAACTAATTAGTCGTAAATAATATTATTCTAGTAAGGCATTCTCGTGAAATTTTAGAAC
TGTAAATTTATTGGTATTAA

Product: transcriptional activator, Rgg/GadR/MutR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTKTESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK

Sequences:

>Translated_284_residues
MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTKTESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK
>Mature_284_residues
MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTKTESFANLV
QYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRT
INYNSYFLLTKEMLNNYIYSSLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33178; Mature: 33178

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLILHDEDYTKTESFANLVQYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEECCCCEEEEHHHHHHHHHHH
SLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCH
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKSKLGVTLRKIRKGKQISLCSVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLILHDEDYTKTESFANLVQYIRKQYSSQSINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSNIIPSDEELLHLTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEECCCCEEEEHHHHHHHHHHH
SLNKTNKQIVSQLAINCFILSIDKEEFSNCSYLISKIKTLLDNELNFYEQTVFLYATGYF
HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECCH
EFKRCQSTSGIEKMKQAIQVFDILGENKLKLHYTDHFNKPVNKK
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]