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The map label for this gene is yjjP [H]

Identifier: 116516263

GI number: 116516263

Start: 1562762

End: 1563520

Strand: Reverse

Name: yjjP [H]

Synonym: SPD_1541

Alternate gene names: 116516263

Gene position: 1563520-1562762 (Counterclockwise)

Preceding gene: 116517182

Following gene: 116516534

Centisome position: 76.41

GC content: 45.19

Gene sequence:

>759_bases
ATGGAAGAATCAAAAGAATTAAATGCCGTCATTGATGTGATTATGCTAGCGGGGACTATTCTCCTTAAAAGTGGCTCAGA
AATCCATCGTGTAGAAGATACCATGATTCGAATCGCGCATTCGCAGGGGATTGTGGATTGCAATGTCCTTGCCATGCCTG
CCGCTATCTTTTTCTCTATTGAAAATACCAATATTTCGCGCATGAAGCGCGTGACCTCCTCTTCTTATAACATCGAAAAA
GTCTGCGATGTGAACCAGATTTCTCGTCAGCTAGTTGGGGGGCAGATTGACTTAGAAACAGCCTTTAAGCAATTGACGGC
CTTGCAAGCTCAACCCCTTCCCTATACTAAGTTGCAGGTAACTCTGGCTGCGACCTTTAGTGCTCCTTTCTTTTCAGTTA
TGTTTAGCGGAAATATCTACGACGCACTTGGGGCAGGAGTGGCGACCTTATTTGGTTTTGCCTTTTCCCTCTATGTGGAA
AAATTTATCCGAATTCCCTTTGTGACAGCCTTTGCTGGAGCCTTTGTCTTTGGGATAATTGCCCAGTTTTGGGCTCGCTA
CACAGGTTTTCCTTCAACGGCAGATTTGATTATAGCTGGTGCGGTCATGCCGTTTGTACCAGGCATTGCCTTGACCAATG
CGGTCCGTGATATTATGACCAACCACATAAACTCTGGTATGAGTAAGATGTTTGAATCCCTGCTCATTACCCTCGCTTTA
GGGGCAGGAACTTCTGTCGCCTTGGTATTGATGAACTAA

Upstream 100 bases:

>100_bases
TCAAAATGAGTAATCAATCTTTGTCATGATTTCATGGCAAAGATTTTTTTTGAGTCCAGATTTGTGATAGAATAGAGGGA
GTTGATAAAAGGAGGAAAGC

Downstream 100 bases:

>100_bases
TATGACACTAACAACCTTTTTATTACAAGCAGTAGCAAGTTTTCTTGCCATTATCACTTTTTTAATCGTACTCAATGTGC
AACGGTCTATGCTCTTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSIENTNISRMKRVTSSSYNIEK
VCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQVTLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVE
KFIRIPFVTAFAGAFVFGIIAQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLAL
GAGTSVALVLMN

Sequences:

>Translated_252_residues
MEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSIENTNISRMKRVTSSSYNIEK
VCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQVTLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVE
KFIRIPFVTAFAGAFVFGIIAQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLAL
GAGTSVALVLMN
>Mature_252_residues
MEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSIENTNISRMKRVTSSSYNIEK
VCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQVTLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVE
KFIRIPFVTAFAGAFVFGIIAQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLAL
GAGTSVALVLMN

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=259, Percent_Identity=25.0965250965251, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27255; Mature: 27255

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSI
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHEEEEEE
ENTNISRMKRVTSSSYNIEKVCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQV
CCCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE
TLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVEKFIRIPFVTAFAGAFVFGII
EEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLAL
HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGTSVALVLMN
CCCCEEEEEEEC
>Mature Secondary Structure
MEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSI
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHEEEEEE
ENTNISRMKRVTSSSYNIEKVCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQV
CCCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE
TLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVEKFIRIPFVTAFAGAFVFGII
EEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLAL
HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGTSVALVLMN
CCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]