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The map label for this gene is yfmM [H]

Identifier: 116516136

GI number: 116516136

Start: 690441

End: 691982

Strand: Direct

Name: yfmM [H]

Synonym: SPD_0671

Alternate gene names: 116516136

Gene position: 690441-691982 (Clockwise)

Preceding gene: 116515988

Following gene: 116516029

Centisome position: 33.74

GC content: 44.03

Gene sequence:

>1542_bases
ATGAGTATTTTAGAAGTTAAAAATCTGAGTCACGGTTTTGGTGACCGTGCAATTTTTGAAGATGTGTCCTTCCGTCTCCT
CAAGGGAGAACATATCGGCCTGGTCGGTGCCAATGGTGAAGGAAAATCAACCTTTATGAGTATCGTGACTGGTAAAATGC
TGCCAGATGAAGGAAAGGTTGAGTGGTCCAAATATGTGACGGCTGGTTACTTGGATCAGCACTCTGTCCTTGCTGAAAGA
CAGTCGGTGCGTGATGTTCTCCGTACGGCTTTTGATGAGCTTTTCAAAGCTGAAGCTCGTATCAATGACCTCTATATGAA
AATGGCTGAAGACGGCGCGGATGTTGATGCTCTCATGGAAGAAGTAGGAGAACTTCAAGACCGTCTGGAGAGTCGTGATT
TCTATACCTTGGATGCTAAGATTGACGAAGTAGCGCGTGCTCTTGGTGTTATGGACTTTGGCATGGATACGGATGTAACT
TCTTTGTCAGGTGGGCAAAGAACCAAGGTGCTTTTGGCAAAACTTCTCCTTGAAAAGCCTGATATCTTGCTGTTGGACGA
GCCGACCAACTACTTGGATGCTGAGCATATTGATTGGCTCAAGCGCTATCTCCAAAACTATGAGAATGCCTTTGTTCTCA
TTTCGCACGATATTCCATTCCTCAATGACGTTATTAATATTGTCTATCATGTGGAAAATCAACAGCTGACGCGTTACTCT
GGTGACTACTACCAGTTCCAAGAAGTTTATGCTATGAAGAAATCTCAGCTAGAGGCAGCCTACGAACGCCAGCAGAAAGA
GATTGCAGACCTCAAGGACTTTGTGGCTCGTAATAAAGCCCGTGTTGCAACTCGTAATATGGCTATGTCTCGTCAAAAGA
AATTGGATAAGATGGATATTATCGAACTCCAAAGTGAGAAACCAAAACCATCCTTTGATTTCAAACCAGCTCGTACACCA
GGGCGCTTTATCTTCCAAGCCAAGAACTTGCAAATTGGTTACAACCGTCCTCTTACTAAGCCTTTAAATCTTACCTTCGA
ACGCAATCAAAAGGTTGCGATTATTGGTGCTAATGGTATTGGAAAAACAACTCTCTTGAAGAGTCTCTTGGGCATTATCT
CGCCAATCGCTGGGGAAGTGGAGCGTGGAGATTATTTAGAACTTGGTTATTTTGAGCAGGAAGTAGAAGGCGGTAATCGC
CAAACTCCTCTTGAAGCTGTCTGGAATGCCTTTCCTGCCCTTAATCAAGCAGAAGTCCGTGCAGCCCTTGCCCGTTGTGG
TTTGACAACCAAACATATTGAAAGCCAGATTCAAGTATTATCAGGGGGAGAGCAAGCCAAGGTTCGTTTCTGTCTCTTGA
TGAATCGTGAAAACAACGTTTTAGTGCTGGACGAGCCGACCAACCATTTGGATGTGGATGCAAAGGATGAGCTCAAACGC
GCTCTCAAAGAATATAGGGGATCTATCCTTATGGTCTGCCACGAGCCAGACTTTTATGAAGGCTGGATAGACCAAATATG
GGATTTTAATAATTTAACTTAA

Upstream 100 bases:

>100_bases
CGCGTCTTTGAGATTGATGATTTGTGGACCAACACTTTGGGTGGCTATCTGGCTTGGCTCCTTTATAAACGATTACATAA
AAACAAGGTAAGGAATTAAA

Downstream 100 bases:

>100_bases
GAATGAGAGTAAAAGAAATACAGTACCGAATGTGGATACTGTATTTTTTTTGGTTTTTAAGATTTAAAATCGTAGTCTTT
CACCACTTCGATGCTGTCGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MSILEVKNLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKMLPDEGKVEWSKYVTAGYLDQHSVLAER
QSVRDVLRTAFDELFKAEARINDLYMKMAEDGADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDTDVT
SLSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQQLTRYS
GDYYQFQEVYAMKKSQLEAAYERQQKEIADLKDFVARNKARVATRNMAMSRQKKLDKMDIIELQSEKPKPSFDFKPARTP
GRFIFQAKNLQIGYNRPLTKPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIISPIAGEVERGDYLELGYFEQEVEGGNR
QTPLEAVWNAFPALNQAEVRAALARCGLTTKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKR
ALKEYRGSILMVCHEPDFYEGWIDQIWDFNNLT

Sequences:

>Translated_513_residues
MSILEVKNLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKMLPDEGKVEWSKYVTAGYLDQHSVLAER
QSVRDVLRTAFDELFKAEARINDLYMKMAEDGADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDTDVT
SLSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQQLTRYS
GDYYQFQEVYAMKKSQLEAAYERQQKEIADLKDFVARNKARVATRNMAMSRQKKLDKMDIIELQSEKPKPSFDFKPARTP
GRFIFQAKNLQIGYNRPLTKPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIISPIAGEVERGDYLELGYFEQEVEGGNR
QTPLEAVWNAFPALNQAEVRAALARCGLTTKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKR
ALKEYRGSILMVCHEPDFYEGWIDQIWDFNNLT
>Mature_512_residues
SILEVKNLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKMLPDEGKVEWSKYVTAGYLDQHSVLAERQ
SVRDVLRTAFDELFKAEARINDLYMKMAEDGADVDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDTDVTS
LSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQQLTRYSG
DYYQFQEVYAMKKSQLEAAYERQQKEIADLKDFVARNKARVATRNMAMSRQKKLDKMDIIELQSEKPKPSFDFKPARTPG
RFIFQAKNLQIGYNRPLTKPLNLTFERNQKVAIIGANGIGKTTLLKSLLGIISPIAGEVERGDYLELGYFEQEVEGGNRQ
TPLEAVWNAFPALNQAEVRAALARCGLTTKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKRA
LKEYRGSILMVCHEPDFYEGWIDQIWDFNNLT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=516, Percent_Identity=28.4883720930233, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI10947137, Length=516, Percent_Identity=28.4883720930233, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=27.3946360153257, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI10947135, Length=514, Percent_Identity=30.9338521400778, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI69354671, Length=514, Percent_Identity=30.9338521400778, Blast_Score=196, Evalue=3e-50,
Organism=Escherichia coli, GI1787041, Length=505, Percent_Identity=33.8613861386139, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1789751, Length=497, Percent_Identity=28.169014084507, Blast_Score=241, Evalue=8e-65,
Organism=Escherichia coli, GI2367384, Length=502, Percent_Identity=29.6812749003984, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1787182, Length=530, Percent_Identity=28.4905660377358, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=30.6010928961749, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI48994997, Length=221, Percent_Identity=24.8868778280543, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081709, Length=222, Percent_Identity=24.7747747747748, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786803, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=511, Percent_Identity=28.1800391389432, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=27.8719397363465, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17553372, Length=524, Percent_Identity=29.9618320610687, Blast_Score=198, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=517, Percent_Identity=31.7214700193424, Blast_Score=230, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=504, Percent_Identity=31.3492063492063, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=398, Percent_Identity=27.6381909547739, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=407, Percent_Identity=25.3071253071253, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=406, Percent_Identity=24.8768472906404, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24666836, Length=524, Percent_Identity=29.3893129770992, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24642252, Length=516, Percent_Identity=27.906976744186, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI18859989, Length=516, Percent_Identity=27.906976744186, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24641342, Length=512, Percent_Identity=28.7109375, Blast_Score=203, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58397; Mature: 58266

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILEVKNLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKMLPDEGKV
CCCEECCCCCCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
EWSKYVTAGYLDQHSVLAERQSVRDVLRTAFDELFKAEARINDLYMKMAEDGADVDALME
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDTDVTSLSGGQRTKVLLAKLLLEKP
HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQQLTRYS
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHEECCCCCHHCC
GDYYQFQEVYAMKKSQLEAAYERQQKEIADLKDFVARNKARVATRNMAMSRQKKLDKMDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
IELQSEKPKPSFDFKPARTPGRFIFQAKNLQIGYNRPLTKPLNLTFERNQKVAIIGANGI
HEECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEEECCCEEEEEECCCC
GKTTLLKSLLGIISPIAGEVERGDYLELGYFEQEVEGGNRQTPLEAVWNAFPALNQAEVR
CHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH
AALARCGLTTKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKR
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHH
ALKEYRGSILMVCHEPDFYEGWIDQIWDFNNLT
HHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SILEVKNLSHGFGDRAIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKMLPDEGKV
CCEECCCCCCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
EWSKYVTAGYLDQHSVLAERQSVRDVLRTAFDELFKAEARINDLYMKMAEDGADVDALME
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDTDVTSLSGGQRTKVLLAKLLLEKP
HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENQQLTRYS
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHEECCCCCHHCC
GDYYQFQEVYAMKKSQLEAAYERQQKEIADLKDFVARNKARVATRNMAMSRQKKLDKMDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
IELQSEKPKPSFDFKPARTPGRFIFQAKNLQIGYNRPLTKPLNLTFERNQKVAIIGANGI
HEECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEEECCCEEEEEECCCC
GKTTLLKSLLGIISPIAGEVERGDYLELGYFEQEVEGGNRQTPLEAVWNAFPALNQAEVR
CHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH
AALARCGLTTKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKR
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHH
ALKEYRGSILMVCHEPDFYEGWIDQIWDFNNLT
HHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]