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The map label for this gene is 116516126

Identifier: 116516126

GI number: 116516126

Start: 1609874

End: 1611025

Strand: Reverse

Name: 116516126

Synonym: SPD_1594

Alternate gene names: NA

Gene position: 1611025-1609874 (Counterclockwise)

Preceding gene: 116517126

Following gene: 116516977

Centisome position: 78.74

GC content: 32.29

Gene sequence:

>1152_bases
ATGTTTAATGGTCGGGTATTGAAAGAATTACGGCTGTTAAATGGTTTAAGTAGAGCAGAATTAGCTCAGAGAATTAATTT
AACGGAACAAGCCATTTGGCAGTTTGAGTCCAACGAAACGAAACCTAAATTATCAACCAAAATGCATTTGGCCAACCAAT
TTCATGTTGATTTAACTTATTTTGAACAGGAAGAAGAGAGCATTCGATTTGATTCTTCTGTAATTGCCTTTAGAAATGCA
GACCTAGCAACACGGAAAACAATAGATATTCAAACTATGTATTTACATAAGGTAGATAGTTTGATTGATTATTTTGAAAG
TTTTGTAATTATACCTAATATTATAATTCATGACCTAAGTAATGTAGTGAGTGAATCTTATCATAAGGGAGAATCCATTG
AGGAATTGGCTCTTTATGCCAGGGAAAAATTAGGTATTTCAAAAGATAATCATGATTTGCTTTATAAATTAGAACGTTCA
GGCATCTATATCGTGGAACGATTAATTAATGGCCAAGCTGATGCTTATAGCGCATGGTCAAAATTGGGAAGACCTTATAT
TGTGTTGGGAACGAATAAATCATCTGTACGTCGAAATTTTGACTTAGCTCATGAGCTAGGACATATTCTTTTACATAAAT
ATAAAGATATGAATAAAGATGGCGATCGTTTGGAGCAAGAAGCAAATTATTTTGCATCATGTTTTTTATTGCCAAAAGAA
GAGTTTTTAGTCAAATTTGAAGAGAGGGTTGGCAAGCGTGTCAGCAATCCTGATAGTTATATTTTATTGAAGTCGGATTT
GAATGTTTCGATACAGGCTTTAGAGTATCGAGCTTTTAAGTTAGGATTATTGACTCCAAAGCAACATTCTTACTTTTATC
GTCAAATTGCGCAAAAAGGTTACAAAATGATTGAACCTTTGGATGATCAAATTTTTGTTAAAAAACCAAGCAAAGTAAAG
AGTATTCTGGACGTCGTTTTGAGTAATCATCTAGTCAGTCTAGCGACTATAATGTCTAAACAAAGTATTCGTTTACAGTT
TATAAGCGAAATATTTTCAGTCGAAATGAAATTTTTTGATCAGTATCAAGAAGATAGAAGAACAGATCGATTTGATAACA
TCATCCCTTTGTACAAAAGAAATAATTTATAA

Upstream 100 bases:

>100_bases
AAGATATTCCTAATTTTTCAGAATTATCGGAAACAGAAGATTTTGAAATTATTCCAAGAATAGAAAAACAAGAAGGTCAA
AAGTAGTAAGGAGTATGTAA

Downstream 100 bases:

>100_bases
TTTAACTGTGAAATAATTTCATGAAGGACATATGGCAGAAATTGGACTTTATCAAACAAGCAGTAGCTTACCAAAAATAA
TCACACAAGCAGCAAGTAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Zn Peptidase; Helix-Turn-Helix Domain Protein; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Phage-Like Protein; Transcription Regulator; DNA-Bining Transcriptional Regulator; Adenine Deaminase

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFNGRVLKELRLLNGLSRAELAQRINLTEQAIWQFESNETKPKLSTKMHLANQFHVDLTYFEQEEESIRFDSSVIAFRNA
DLATRKTIDIQTMYLHKVDSLIDYFESFVIIPNIIIHDLSNVVSESYHKGESIEELALYAREKLGISKDNHDLLYKLERS
GIYIVERLINGQADAYSAWSKLGRPYIVLGTNKSSVRRNFDLAHELGHILLHKYKDMNKDGDRLEQEANYFASCFLLPKE
EFLVKFEERVGKRVSNPDSYILLKSDLNVSIQALEYRAFKLGLLTPKQHSYFYRQIAQKGYKMIEPLDDQIFVKKPSKVK
SILDVVLSNHLVSLATIMSKQSIRLQFISEIFSVEMKFFDQYQEDRRTDRFDNIIPLYKRNNL

Sequences:

>Translated_383_residues
MFNGRVLKELRLLNGLSRAELAQRINLTEQAIWQFESNETKPKLSTKMHLANQFHVDLTYFEQEEESIRFDSSVIAFRNA
DLATRKTIDIQTMYLHKVDSLIDYFESFVIIPNIIIHDLSNVVSESYHKGESIEELALYAREKLGISKDNHDLLYKLERS
GIYIVERLINGQADAYSAWSKLGRPYIVLGTNKSSVRRNFDLAHELGHILLHKYKDMNKDGDRLEQEANYFASCFLLPKE
EFLVKFEERVGKRVSNPDSYILLKSDLNVSIQALEYRAFKLGLLTPKQHSYFYRQIAQKGYKMIEPLDDQIFVKKPSKVK
SILDVVLSNHLVSLATIMSKQSIRLQFISEIFSVEMKFFDQYQEDRRTDRFDNIIPLYKRNNL
>Mature_383_residues
MFNGRVLKELRLLNGLSRAELAQRINLTEQAIWQFESNETKPKLSTKMHLANQFHVDLTYFEQEEESIRFDSSVIAFRNA
DLATRKTIDIQTMYLHKVDSLIDYFESFVIIPNIIIHDLSNVVSESYHKGESIEELALYAREKLGISKDNHDLLYKLERS
GIYIVERLINGQADAYSAWSKLGRPYIVLGTNKSSVRRNFDLAHELGHILLHKYKDMNKDGDRLEQEANYFASCFLLPKE
EFLVKFEERVGKRVSNPDSYILLKSDLNVSIQALEYRAFKLGLLTPKQHSYFYRQIAQKGYKMIEPLDDQIFVKKPSKVK
SILDVVLSNHLVSLATIMSKQSIRLQFISEIFSVEMKFFDQYQEDRRTDRFDNIIPLYKRNNL

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44799; Mature: 44799

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNGRVLKELRLLNGLSRAELAQRINLTEQAIWQFESNETKPKLSTKMHLANQFHVDLTY
CCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEEEE
FEQEEESIRFDSSVIAFRNADLATRKTIDIQTMYLHKVDSLIDYFESFVIIPNIIIHDLS
ECCCHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVVSESYHKGESIEELALYAREKLGISKDNHDLLYKLERSGIYIVERLINGQADAYSAWS
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHH
KLGRPYIVLGTNKSSVRRNFDLAHELGHILLHKYKDMNKDGDRLEQEANYFASCFLLPKE
HCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCHH
EFLVKFEERVGKRVSNPDSYILLKSDLNVSIQALEYRAFKLGLLTPKQHSYFYRQIAQKG
HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCC
YKMIEPLDDQIFVKKPSKVKSILDVVLSNHLVSLATIMSKQSIRLQFISEIFSVEMKFFD
HHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYQEDRRTDRFDNIIPLYKRNNL
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFNGRVLKELRLLNGLSRAELAQRINLTEQAIWQFESNETKPKLSTKMHLANQFHVDLTY
CCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEEEE
FEQEEESIRFDSSVIAFRNADLATRKTIDIQTMYLHKVDSLIDYFESFVIIPNIIIHDLS
ECCCHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVVSESYHKGESIEELALYAREKLGISKDNHDLLYKLERSGIYIVERLINGQADAYSAWS
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHH
KLGRPYIVLGTNKSSVRRNFDLAHELGHILLHKYKDMNKDGDRLEQEANYFASCFLLPKE
HCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCHH
EFLVKFEERVGKRVSNPDSYILLKSDLNVSIQALEYRAFKLGLLTPKQHSYFYRQIAQKG
HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCC
YKMIEPLDDQIFVKKPSKVKSILDVVLSNHLVSLATIMSKQSIRLQFISEIFSVEMKFFD
HHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYQEDRRTDRFDNIIPLYKRNNL
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA