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The map label for this gene is yafQ [H]

Identifier: 116516116

GI number: 116516116

Start: 255824

End: 256102

Strand: Direct

Name: yafQ [H]

Synonym: SPD_0256

Alternate gene names: 116516116

Gene position: 255824-256102 (Clockwise)

Preceding gene: 116516886

Following gene: 116516451

Centisome position: 12.5

GC content: 35.84

Gene sequence:

>279_bases
GTGCTTAAGATTCGTTATCATAAACAGTTTAAAAAAGATTTTAAGTTGGCTATGAAGCGTGGTTTGAAGGCAGAATTATT
AGAAGAAGTTTTGAATTTTCTGGTTCAAGAAAAAGAACATCCTGCCAGATATCGTGATCATTCATTGACGGCATCCAAGC
ATTTTCAAGGAGTTCGTGAATGCCATACCCAGCCAGATTGGCTTTTGGTTTATAAAGTAGACAAGTCGGAATTGATTTTA
AATTTGCTGAGGACAGGCAGTCACAGTGATTTATTTTAA

Upstream 100 bases:

>100_bases
GACGAAAATCGGAAGTTGCTCCAAGTGTTAACGGATTTAGACCAAAATCGTAATATGAGCCAGTCTTTTGAATCAGTCTC
AGATTTGATGGAGGACTTAC

Downstream 100 bases:

>100_bases
TCTATTTTAAGGGGGTTCTCATGAAACTAAGAATATTTGCGGAAGATAAGCCGGCTAAGAAGGTATTTGAATATCAATTA
GAACTTGCTGATCGTACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLKIRYHKQFKKDFKLAMKRGLKAELLEEVLNFLVQEKEHPARYRDHSLTASKHFQGVRECHTQPDWLLVYKVDKSELIL
NLLRTGSHSDLF

Sequences:

>Translated_92_residues
MLKIRYHKQFKKDFKLAMKRGLKAELLEEVLNFLVQEKEHPARYRDHSLTASKHFQGVRECHTQPDWLLVYKVDKSELIL
NLLRTGSHSDLF
>Mature_92_residues
MLKIRYHKQFKKDFKLAMKRGLKAELLEEVLNFLVQEKEHPARYRDHSLTASKHFQGVRECHTQPDWLLVYKVDKSELIL
NLLRTGSHSDLF

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0711 [H]

Homologues:

Organism=Escherichia coli, GI1786419, Length=90, Percent_Identity=38.8888888888889, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004386
- InterPro:   IPR012753 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10993; Mature: 10993

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIRYHKQFKKDFKLAMKRGLKAELLEEVLNFLVQEKEHPARYRDHSLTASKHFQGVRE
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHH
CHTQPDWLLVYKVDKSELILNLLRTGSHSDLF
HCCCCCEEEEEEECHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKIRYHKQFKKDFKLAMKRGLKAELLEEVLNFLVQEKEHPARYRDHSLTASKHFQGVRE
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHH
CHTQPDWLLVYKVDKSELILNLLRTGSHSDLF
HCCCCCEEEEEEECHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]