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The map label for this gene is ctrD [H]

Identifier: 116516074

GI number: 116516074

Start: 860769

End: 861245

Strand: Direct

Name: ctrD [H]

Synonym: SPD_0845

Alternate gene names: 116516074

Gene position: 860769-861245 (Clockwise)

Preceding gene: 116515500

Following gene: 116517169

Centisome position: 42.07

GC content: 41.72

Gene sequence:

>477_bases
ATGTTAAATCTTACTCATGTTACCTTAAAAACGCGACAAGTCATCTTGCAAGATGCGGATTTTACCTTTAAAAAGGGTAG
GATTTATGGCCTTCTTGCTATCAATGGCTCGGGAAAGACGACACTATTCCGAGCTATGAGCAAGTTGCTTCCCCTTAGTA
GTGGACACATCGCAGTTCCTCCTTCTTTGTTTTATTATGAGAGCGTTGAATGGCTGGATGGAAACTTAAGTGGGATGGAC
TACCTTCGTCTCATAAAAAACATCTGGAAGTCAGACCTAAACTTGAGAGATGAAATCGCCTACTGGGAAATGGCTGACTA
TATCAGTCTTCCCATCCGCAAGTATTCCTTAGGGATGAAGCAACGCTTGGTGATTGCTATGTATTTTCTCAGTCAGGCCA
AATGCTGGCTCATGGATGAGATTACAAATGGCTTAGACGAGTATTATCGACAGAAGTTTTTTGATAGGCTAGCATAA

Upstream 100 bases:

>100_bases
TATAAAGTTGGCGGAGGCTGGAACTACGCTCGTTATGAGGTCATAAACTACTATACTGGAGGTTATTAATCCTTAAAGAG
TGAGAAAAGGAGGGCTGGAT

Downstream 100 bases:

>100_bases
ATCGATAGACAAGAACAGCTGGTTCTTTTAAGTTCCCACTATAAGGAAGAGTTGGTTGATATCTGCGATAGAGTAGTAAC
CATTCATCAGGGGCAGATAG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: Capsular-polysaccharide-transporting ATPase [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAVPPSLFYYESVEWLDGNLSGMD
YLRLIKNIWKSDLNLRDEIAYWEMADYISLPIRKYSLGMKQRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA

Sequences:

>Translated_158_residues
MLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAVPPSLFYYESVEWLDGNLSGMD
YLRLIKNIWKSDLNLRDEIAYWEMADYISLPIRKYSLGMKQRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA
>Mature_158_residues
MLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAVPPSLFYYESVEWLDGNLSGMD
YLRLIKNIWKSDLNLRDEIAYWEMADYISLPIRKYSLGMKQRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA

Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: =3.6.3.38 [H]

Molecular weight: Translated: 18451; Mature: 18451

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAVP
CCCEEEEHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEECC
PSLFYYESVEWLDGNLSGMDYLRLIKNIWKSDLNLRDEIAYWEMADYISLPIRKYSLGMK
CCHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCHH
QRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAVP
CCCEEEEHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEECC
PSLFYYESVEWLDGNLSGMDYLRLIKNIWKSDLNLRDEIAYWEMADYISLPIRKYSLGMK
CCHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHCCHH
QRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]