| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is ppc
Identifier: 116516040
GI number: 116516040
Start: 965156
End: 967852
Strand: Direct
Name: ppc
Synonym: SPD_0953
Alternate gene names: 116516040
Gene position: 965156-967852 (Clockwise)
Preceding gene: 116517219
Following gene: 116517122
Centisome position: 47.17
GC content: 38.34
Gene sequence:
>2697_bases ATGTCTCTTCAAAAATTAGAAAATTCTAGTAATAAAAGTGTTGTGCAAGAAGAAGTCTTGATTCTAACAGAATTACTGGA AGATATTACTAAAAATATGCTTGCCCCAGAGACCTTTGAAAAAATAATACAGTTGAAAGAATTATCAACGCAGGAAGATT ATCAAGGTCTAAACCGTCTAGTGACTAGCTTATCAAATGATGAAATGGTCTATATTTCACGCTATTTCTCTATCTTGCCT CTTTTGATTAATATTTCAGAGGATGTGGATTTAGCTTATGAAATCAATCATCAAAATAATATTGATCAGGACTATTTAGG TAAATTATCTACAACGATTAAATTGGTAGCAGAAAAGGAAAATGCCGTTGAGATCCTAGAACACTTGAATGTTGTTCCGG TTTTGACAGCCCATCCAACACAAGTGCAACGCAAAAGTATGTTGGATTTAACAAATCATATTCATAGTCTTTTGCGTAAA TACCGTGATGTTAAGTTGGGGTTGATCAATAAAGATAAATGGTACAATGATTTGCGTCGTTACATCGAAATTATCATGCA GACAGACATGATTCGTGAGAAAAAATTAAAAGTGACTAACGAAATCACGAATGCTATGGAATATTATAACAGCTCCTTTT TGAAAGCTGTACCTCATTTGACGACGGAGTATAAGCGCTTAGCGCAAGCACATGGTCTGAATTTAAAACAGGCTAAACCA ATCACCATGGGTATGTGGATAGGTGGTGACCGTGATGGAAATCCATTTGTTACAGCAAAGACCTTGAAGCAGTCTGCACT CACTCAGTGTGAAGTCATCATGAACTACTATGATAAAAAGATTTACCAACTTTATCGTGAATTTTCTCTTTCAACTAGCA TTGTCAACGTCAGCAAGCAAGTCAGAGAAATGGCTCGTCAATCCAAGGATAACTCGATTTACCGCGAAAAAGAGCTTTAC CGTCGTGCCTTGTTTGATATTCAATCAAAAATTCAGGCAACTAAAACCTATCTGATTGAGGATGAAGAAGTTGGGACTCG TTATGAAACCGCCAATGATTTCTACAAGGATTTGATTGCCATTCGAGATTCTCTACTAGAAAATAAGGGCGAGTCCTTGA TTTCAGGTGATTTTGTGGAATTATTGCAGGCAGTAGAGATATTTGGTTTTTACTTAGCATCAATTGATATGCGACAAGAC TCTAGCGTCTATGAAGCCTGTGTGGCAGAACTCTTGAAATCAGCAGGAATTCATTCTCGTTATAGCGAGTTGAGCGAAGA AGAAAAGTGTGACCTTCTCTTGAAAGAATTAGAAGAAGATCCCCGAATTCTTTCTGCGACTCACGCAGAAAAATCAGAAT TATTAGCAAAAGAACTAGCTATTTTTAAGACGGCTCGTGTTTTGAAAGATAAGTTGGGAGATGATGTCATCCGTCAGACC ATCATTTCACATGCAACCAGCCTTTCTGATATGCTAGAATTAGCTATTCTGTTAAAAGAAGTAGGACTGGTGGATACGGA AAGGGCGCGTGTTCAGATTGTTCCCCTTTTTGAAACAATTGAAGACTTGGATCATTCAGAGGAAACAATGAGAAAATATC TTTCTCTTAGCCTTGCCAAAAAATGGATTGACTCACGAAATAACTACCAAGAAATCATGCTTGGCTACTCTGACAGTAAT AAAGATGGCGGTTACTTGTCATCATGTTGGACCCTCTACAAGGCTCAACAACAATTGACTGCTATTGGAGATGAATTTGG CGTTAAGGTTACCTTCTTCCATGGTCGTGGTGGTACTGTCGGTCGTGGTGGTGGGCCAACCTATGAAGCCATTACATCTC AACCGCTCAAGTCTATCAAGGATCGTATCCGCTTGACGGAGCAGGGTGAAGTAATTGGGAATAAATACGGTAACAAAGAC GCCGCTTACTATAACCTTGAAATGCTAGTATCGGCAGCTATTAACCGTATGATTACTCAGAAGAAGAGCGATACCAATAC CCCAAATCGTTATGAAGCCATTATGGATCAAGTAGTGGACCGTAGTTACGATATCTACCGTGATTTGGTCTTTGGTAATG AGCATTTCTATGATTATTTCTTCGAGTCAAGTCCAATCAAGGCTATTTCAAGTTTTAATATTGGTTCTCGTCCAGCCGCT CGTAAGACTATTACTGAAATCGGTGGATTGCGTGCTATCCCTTGGGTATTCTCATGGTCACAGAGTCGTGTTATGTTCCC TGGATGGTACGGGGTTGGTTCAAGCTTCAAGGAATTTATCAATAAAAATCCAGAGAATATTGCTATCTTACGAGATATGT ACCAAAATTGGCCTTTCTTCCAATCGCTTCTTTCAAATGTTGATATGGTTTTGTCAAAATCAAATATGAATATTGCTTTT GAATATGCTAAACTTTGTGAAGACGAGCAAGTTAAGGCCATCTATGAGACTATTTTAAATGAATGGCAAGTTACTAAGAA CGTTATCTTGGCTATTGAAGGACATGACGAACTCTTAGCTGACAATCCATATCTAAAAGCTAGTCTGGATTACCGTATGC CTTACTTTAATATTCTCAACTATATTCAGTTAGAGTTGATTAAACGCCAACGTCGTGGAGAATTGTCCAGTGATCAAGAA CGATTGATTCATATCACCATCAACGGAATTGCGACAGGATTGCGTAATTCAGGTTGA
Upstream 100 bases:
>100_bases TTAAATATTGATGCCAGTGAAAAACGCGCTAAGTTGTACCGAGAATTGGAAAATCAACCAATGAACCTTCTGTTGAAGTA GGATAAAGAAAGGATAGTTT
Downstream 100 bases:
>100_bases TAATTTTCAAGAGTGAATGCTAAAAGTGAATATCAAAAAAATTCTAATAGACTATTGACAAGTAGTTTAAAAATGATATA ATTTAACCATTCAGAAAAGT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 898; Mature: 897
Protein sequence:
>898_residues MSLQKLENSSNKSVVQEEVLILTELLEDITKNMLAPETFEKIIQLKELSTQEDYQGLNRLVTSLSNDEMVYISRYFSILP LLINISEDVDLAYEINHQNNIDQDYLGKLSTTIKLVAEKENAVEILEHLNVVPVLTAHPTQVQRKSMLDLTNHIHSLLRK YRDVKLGLINKDKWYNDLRRYIEIIMQTDMIREKKLKVTNEITNAMEYYNSSFLKAVPHLTTEYKRLAQAHGLNLKQAKP ITMGMWIGGDRDGNPFVTAKTLKQSALTQCEVIMNYYDKKIYQLYREFSLSTSIVNVSKQVREMARQSKDNSIYREKELY RRALFDIQSKIQATKTYLIEDEEVGTRYETANDFYKDLIAIRDSLLENKGESLISGDFVELLQAVEIFGFYLASIDMRQD SSVYEACVAELLKSAGIHSRYSELSEEEKCDLLLKELEEDPRILSATHAEKSELLAKELAIFKTARVLKDKLGDDVIRQT IISHATSLSDMLELAILLKEVGLVDTERARVQIVPLFETIEDLDHSEETMRKYLSLSLAKKWIDSRNNYQEIMLGYSDSN KDGGYLSSCWTLYKAQQQLTAIGDEFGVKVTFFHGRGGTVGRGGGPTYEAITSQPLKSIKDRIRLTEQGEVIGNKYGNKD AAYYNLEMLVSAAINRMITQKKSDTNTPNRYEAIMDQVVDRSYDIYRDLVFGNEHFYDYFFESSPIKAISSFNIGSRPAA RKTITEIGGLRAIPWVFSWSQSRVMFPGWYGVGSSFKEFINKNPENIAILRDMYQNWPFFQSLLSNVDMVLSKSNMNIAF EYAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLADNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQE RLIHITINGIATGLRNSG
Sequences:
>Translated_898_residues MSLQKLENSSNKSVVQEEVLILTELLEDITKNMLAPETFEKIIQLKELSTQEDYQGLNRLVTSLSNDEMVYISRYFSILP LLINISEDVDLAYEINHQNNIDQDYLGKLSTTIKLVAEKENAVEILEHLNVVPVLTAHPTQVQRKSMLDLTNHIHSLLRK YRDVKLGLINKDKWYNDLRRYIEIIMQTDMIREKKLKVTNEITNAMEYYNSSFLKAVPHLTTEYKRLAQAHGLNLKQAKP ITMGMWIGGDRDGNPFVTAKTLKQSALTQCEVIMNYYDKKIYQLYREFSLSTSIVNVSKQVREMARQSKDNSIYREKELY RRALFDIQSKIQATKTYLIEDEEVGTRYETANDFYKDLIAIRDSLLENKGESLISGDFVELLQAVEIFGFYLASIDMRQD SSVYEACVAELLKSAGIHSRYSELSEEEKCDLLLKELEEDPRILSATHAEKSELLAKELAIFKTARVLKDKLGDDVIRQT IISHATSLSDMLELAILLKEVGLVDTERARVQIVPLFETIEDLDHSEETMRKYLSLSLAKKWIDSRNNYQEIMLGYSDSN KDGGYLSSCWTLYKAQQQLTAIGDEFGVKVTFFHGRGGTVGRGGGPTYEAITSQPLKSIKDRIRLTEQGEVIGNKYGNKD AAYYNLEMLVSAAINRMITQKKSDTNTPNRYEAIMDQVVDRSYDIYRDLVFGNEHFYDYFFESSPIKAISSFNIGSRPAA RKTITEIGGLRAIPWVFSWSQSRVMFPGWYGVGSSFKEFINKNPENIAILRDMYQNWPFFQSLLSNVDMVLSKSNMNIAF EYAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLADNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQE RLIHITINGIATGLRNSG >Mature_897_residues SLQKLENSSNKSVVQEEVLILTELLEDITKNMLAPETFEKIIQLKELSTQEDYQGLNRLVTSLSNDEMVYISRYFSILPL LINISEDVDLAYEINHQNNIDQDYLGKLSTTIKLVAEKENAVEILEHLNVVPVLTAHPTQVQRKSMLDLTNHIHSLLRKY RDVKLGLINKDKWYNDLRRYIEIIMQTDMIREKKLKVTNEITNAMEYYNSSFLKAVPHLTTEYKRLAQAHGLNLKQAKPI TMGMWIGGDRDGNPFVTAKTLKQSALTQCEVIMNYYDKKIYQLYREFSLSTSIVNVSKQVREMARQSKDNSIYREKELYR RALFDIQSKIQATKTYLIEDEEVGTRYETANDFYKDLIAIRDSLLENKGESLISGDFVELLQAVEIFGFYLASIDMRQDS SVYEACVAELLKSAGIHSRYSELSEEEKCDLLLKELEEDPRILSATHAEKSELLAKELAIFKTARVLKDKLGDDVIRQTI ISHATSLSDMLELAILLKEVGLVDTERARVQIVPLFETIEDLDHSEETMRKYLSLSLAKKWIDSRNNYQEIMLGYSDSNK DGGYLSSCWTLYKAQQQLTAIGDEFGVKVTFFHGRGGTVGRGGGPTYEAITSQPLKSIKDRIRLTEQGEVIGNKYGNKDA AYYNLEMLVSAAINRMITQKKSDTNTPNRYEAIMDQVVDRSYDIYRDLVFGNEHFYDYFFESSPIKAISSFNIGSRPAAR KTITEIGGLRAIPWVFSWSQSRVMFPGWYGVGSSFKEFINKNPENIAILRDMYQNWPFFQSLLSNVDMVLSKSNMNIAFE YAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLADNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQER LIHITINGIATGLRNSG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=908, Percent_Identity=28.8546255506608, Blast_Score=349, Evalue=6e-97,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_STRP2 (Q04KL8)
Other databases:
- EMBL: CP000410 - RefSeq: YP_816430.1 - ProteinModelPortal: Q04KL8 - STRING: Q04KL8 - PhosSite: Q04KL8 - EnsemblBacteria: EBSTRT00000020363 - GeneID: 4441700 - GenomeReviews: CP000410_GR - KEGG: spd:SPD_0953 - eggNOG: COG2352 - GeneTree: EBGT00050000028190 - HOGENOM: HBG351035 - OMA: AIPWVFG - ProtClustDB: PRK00009 - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 103210; Mature: 103079
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 138-138 ACT_SITE 561-561
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQKLENSSNKSVVQEEVLILTELLEDITKNMLAPETFEKIIQLKELSTQEDYQGLNRL CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH VTSLSNDEMVYISRYFSILPLLINISEDVDLAYEINHQNNIDQDYLGKLSTTIKLVAEKE HHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCH NAVEILEHLNVVPVLTAHPTQVQRKSMLDLTNHIHSLLRKYRDVKLGLINKDKWYNDLRR HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH YIEIIMQTDMIREKKLKVTNEITNAMEYYNSSFLKAVPHLTTEYKRLAQAHGLNLKQAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ITMGMWIGGDRDGNPFVTAKTLKQSALTQCEVIMNYYDKKIYQLYREFSLSTSIVNVSKQ CEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREMARQSKDNSIYREKELYRRALFDIQSKIQATKTYLIEDEEVGTRYETANDFYKDLIA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH IRDSLLENKGESLISGDFVELLQAVEIFGFYLASIDMRQDSSVYEACVAELLKSAGIHSR HHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH YSELSEEEKCDLLLKELEEDPRILSATHAEKSELLAKELAIFKTARVLKDKLGDDVIRQT HHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IISHATSLSDMLELAILLKEVGLVDTERARVQIVPLFETIEDLDHSEETMRKYLSLSLAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH KWIDSRNNYQEIMLGYSDSNKDGGYLSSCWTLYKAQQQLTAIGDEFGVKVTFFHGRGGTV HHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC GRGGGPTYEAITSQPLKSIKDRIRLTEQGEVIGNKYGNKDAAYYNLEMLVSAAINRMITQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KKSDTNTPNRYEAIMDQVVDRSYDIYRDLVFGNEHFYDYFFESSPIKAISSFNIGSRPAA CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCCHH RKTITEIGGLRAIPWVFSWSQSRVMFPGWYGVGSSFKEFINKNPENIAILRDMYQNWPFF HHHHHHHCCCEECCHHEECCCCCEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHH QSLLSNVDMVLSKSNMNIAFEYAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLA HHHHHHHHHHEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHC DNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQERLIHITINGIATGLRNSG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHCCCCC >Mature Secondary Structure SLQKLENSSNKSVVQEEVLILTELLEDITKNMLAPETFEKIIQLKELSTQEDYQGLNRL CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH VTSLSNDEMVYISRYFSILPLLINISEDVDLAYEINHQNNIDQDYLGKLSTTIKLVAEKE HHHCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCH NAVEILEHLNVVPVLTAHPTQVQRKSMLDLTNHIHSLLRKYRDVKLGLINKDKWYNDLRR HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH YIEIIMQTDMIREKKLKVTNEITNAMEYYNSSFLKAVPHLTTEYKRLAQAHGLNLKQAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ITMGMWIGGDRDGNPFVTAKTLKQSALTQCEVIMNYYDKKIYQLYREFSLSTSIVNVSKQ CEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREMARQSKDNSIYREKELYRRALFDIQSKIQATKTYLIEDEEVGTRYETANDFYKDLIA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH IRDSLLENKGESLISGDFVELLQAVEIFGFYLASIDMRQDSSVYEACVAELLKSAGIHSR HHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH YSELSEEEKCDLLLKELEEDPRILSATHAEKSELLAKELAIFKTARVLKDKLGDDVIRQT HHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IISHATSLSDMLELAILLKEVGLVDTERARVQIVPLFETIEDLDHSEETMRKYLSLSLAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH KWIDSRNNYQEIMLGYSDSNKDGGYLSSCWTLYKAQQQLTAIGDEFGVKVTFFHGRGGTV HHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC GRGGGPTYEAITSQPLKSIKDRIRLTEQGEVIGNKYGNKDAAYYNLEMLVSAAINRMITQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH KKSDTNTPNRYEAIMDQVVDRSYDIYRDLVFGNEHFYDYFFESSPIKAISSFNIGSRPAA CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCCCCCCHH RKTITEIGGLRAIPWVFSWSQSRVMFPGWYGVGSSFKEFINKNPENIAILRDMYQNWPFF HHHHHHHCCCEECCHHEECCCCCEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHHH QSLLSNVDMVLSKSNMNIAFEYAKLCEDEQVKAIYETILNEWQVTKNVILAIEGHDELLA HHHHHHHHHHEECCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHC DNPYLKASLDYRMPYFNILNYIQLELIKRQRRGELSSDQERLIHITINGIATGLRNSG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA