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The map label for this gene is ypjC [H]

Identifier: 116516022

GI number: 116516022

Start: 1004263

End: 1005111

Strand: Reverse

Name: ypjC [H]

Synonym: SPD_0995

Alternate gene names: 116516022

Gene position: 1005111-1004263 (Counterclockwise)

Preceding gene: 116515690

Following gene: 116516220

Centisome position: 49.12

GC content: 37.1

Gene sequence:

>849_bases
ATGATTAAAAAAATTTACCCCATTTTTACCATTTTACTAGGTGCTGCTATTTATGCTTTTGGACTGACTTATTTTGTAGT
TCCCCATCATCTCTTTGAAGGAGGGGCGACAGGCATTACCCTCATCACCTTTTATCTTTTTAAAATCCCTGTTTCCCTCA
TGAACCTGCTGATTAATATTCCCCTTTTCATCCTAGCTTGGAAGATCTTTGGAGCCAAATCCCTCTATTCTAGTTTACTA
GGAACCTTAGCTTTGTCCGCCTGGTTAGCTTTTTTTGAGCATATTCCCCTTCATATTGATCTTCAAGGTGATTTACTAAT
CACAGCCCTTATAGCGGGAATCCTATTGGGAATTGGCCTTGGAATTATTTTTAATGCTGGAGGTACAACTGGCGGAACTG
ATATTCTAGCTCGTATTCTCAACAAATACACTCATATATCCATAGGAAAACTGCTCTTTATCTTAGATTTTTGTATTCTC
ATGTTGATTCTCCTAATCTTCAAGGATTTGAGATTGGTTTCCTACACGCTTTTGTTTGATTTTATTGTTTCTCGTGTTAT
TGATTTGATTGGTGAAGGAGGATATGCCGGCAAAGGCTTTATGATTATCACAAAACGTCCTGACCAACTTGCTAAGGCGA
TTAATGATGACCTCGGAAGAGGTGTTACTTTTATTTCTGGTCAAGGCTACTATAGTAAAGAAAATTTGAAAATCATCTAC
TGTATTGTCGGAAGAAATGAAATTGTGAAAACGAAGGAAATGATTCATCGAATCGATCCTCAAGCCTTTATAACTATTAC
AGAAGCCCATGAAATCCTAGGAGAAGGCTTCACCTTTGAAAAAGAATAA

Upstream 100 bases:

>100_bases
ACTTTTAATTATATCAAAAAAAAGATTAAAAATCCTAATGGAGTCAATCAAATTTTCCGTAAAATTTGATATAATCAACT
TATAAGAAAAGAGGTGTCCT

Downstream 100 bases:

>100_bases
AAAGAGGTAATGTCGTGACCTCAAAAGTTAGACTAAATCATCTATCTTTTGGGTTACAGACAACCTCTTTTTTGTTTTAT
TTACTCAAGCTCTTAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINIPLFILAWKIFGAKSLYSSLL
GTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGLGIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCIL
MLILLIFKDLRLVSYTLLFDFIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIY
CIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE

Sequences:

>Translated_282_residues
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINIPLFILAWKIFGAKSLYSSLL
GTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGLGIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCIL
MLILLIFKDLRLVSYTLLFDFIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIY
CIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE
>Mature_282_residues
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINIPLFILAWKIFGAKSLYSSLL
GTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGLGIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCIL
MLILLIFKDLRLVSYTLLFDFIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIY
CIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 31282; Mature: 31282

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLFILAWKIFGAKSLYSSLLGTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
GIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCILMLILLIFKDLRLVSYTLLFD
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIY
HHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEE
CIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE
EEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLFILAWKIFGAKSLYSSLLGTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH
GIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCILMLILLIFKDLRLVSYTLLFD
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVSRVIDLIGEGGYAGKGFMIITKRPDQLAKAINDDLGRGVTFISGQGYYSKENLKIIY
HHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEE
CIVGRNEIVKTKEMIHRIDPQAFITITEAHEILGEGFTFEKE
EEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]