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The map label for this gene is paaI [H]

Identifier: 116516006

GI number: 116516006

Start: 1646148

End: 1646552

Strand: Reverse

Name: paaI [H]

Synonym: SPD_1632

Alternate gene names: 116516006

Gene position: 1646552-1646148 (Counterclockwise)

Preceding gene: 116517165

Following gene: 116516583

Centisome position: 80.47

GC content: 42.96

Gene sequence:

>405_bases
ATGAAAGACTTTCATTTTGACGCTATATCTGCCTTTGAAAATTACGAAATTGAAAAAATGAGAGATGGTCACGTTGTGGT
GACGACCAAAGTAGTGAACTCATCGCTCAACTACTATGGCAATGCCCATGGTGGCTATCTATTCACGCTATGTGACCAAA
TCAGTGGTTTGGTGGTTATCTCGCTGGGACTTGATGGGGTGACACTCCAATCCTCTATCAACTACCTTAAGGCAGGAAAA
CTCGACGATGTATTGACCATTAAAGGAGAATGTGTCCATCAAGGTCGTACAACCTGTGTGATGGATGTGGATATCACCAA
TCAAGAGGGCAGAAATGTCTGTAAGGCAACCTTTACCATGTTTGTCACAGGCCAAAGGTCTGAGGAAAGACGGGTAAGTA
TATAA

Upstream 100 bases:

>100_bases
TGTGGAACAGGTCGGAATTTTACTAGACTAGGAGCTTTCTCCTTGCACAGTCCTATAAAAAGTAGTATCATAGTGTCGTT
TGAAATATCAGGAGGAAACG

Downstream 100 bases:

>100_bases
AGAAAGGTGAGTGGGATAAATTTATCTCACTCATTTTTAATTTATGAGATATGTTAGAAGGAAATATAAAAGAGAGTGAT
GAAATACAAATGTAATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phenylacetic acid degradation protein PaaI [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGK
LDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQRSEERRVSI

Sequences:

>Translated_134_residues
MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGK
LDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQRSEERRVSI
>Mature_134_residues
MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGK
LDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQRSEERRVSI

Specific function: Thioesterase with a preference for ring-hydroxylated phenylacetyl-CoA esters. Hydrolyzes 3,4-dihydroxyphenylacetyl-CoA, 3-hydroxyphenylacetyl-CoA and 4-hydroxyphenylacetyl-CoA. Inactive towards 4-hydroxybenzoyl-CoA and 4-hydroxyphenacyl-CoA [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787662, Length=107, Percent_Identity=35.5140186915888, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011973
- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14876; Mature: 14876

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVI
CCCCCCHHHHHHCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEE
SLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTM
EECCCCEEECCCCCCCCCCCCCCEEEECCEEEECCCEEEEEEEEECCCCCCHHEEEEEEE
FVTGQRSEERRVSI
EEECCCCCCCCCCC
>Mature Secondary Structure
MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVI
CCCCCCHHHHHHCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEE
SLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTM
EECCCCEEECCCCCCCCCCCCCCEEEECCEEEECCCEEEEEEEEECCCCCCHHEEEEEEE
FVTGQRSEERRVSI
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]