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The map label for this gene is ssuC [C]

Identifier: 116515916

GI number: 116515916

Start: 2005245

End: 2005961

Strand: Reverse

Name: ssuC [C]

Synonym: SPD_2026

Alternate gene names: 116515916

Gene position: 2005961-2005245 (Counterclockwise)

Preceding gene: 116516871

Following gene: 116516189

Centisome position: 98.04

GC content: 42.96

Gene sequence:

>717_bases
TTGGGCTTTCTCGGAGTATTGTCAATCTGGCAGTTAGCAGGTTTTCTTAAACTTCTCCCCAAGTTTATCCTGCCGACACC
TCTTGAAATTCTCCAGCCCTTTGTTCGTGACAGAGAATTTCTCTGGCACCATAGCTGGGCGACCTTGAGAGTGGCTTTAC
TGGGGCTGATTTTGGGAGTTTTGATTGCCTGTCTTATGGCTGTGCTCATGGATAGTTTGACTTGGCTCAATGACCTGATT
TACCCTATGATGGTGGTCATTCAGACCATTCCGACCATTGCCATAGCTCCTATCCTGGTCTTGTGGCTGGGTTATGGGAT
TTTGCCCAAGATTGTCTTGATTATCTTAACAACAACCTTTCCCATCATCGTTAGTATTTTGGACGGTTTTAGGCATTGTG
ACAAGGATATGCTGACTTTGTTTAGTCTGATGCGAGCAAACCCTTGGCAAATCCTGTGGCATTTTAAAATCCCGGTTAGC
CTGCCTTACTTTTATGCAGGTCTGAGGGTCAGTGTCTCCTACGCCTTTATCACAACTGTGGTATCTGAGTGGTTGGGAGG
TTTTGAAGGTCTTGGTGTTTATATGATTCAGTCTAAAAAACTGTTTCAGTATGATACCATGTTTGCCATTATTATTCTGG
TGTCGATTATCAGTCTTTTGGGTATGAAGCTGGTCGATATCAGTGAAAAATATGTGATTAAATGGAAACGTACTTAA

Upstream 100 bases:

>100_bases
GAGGCAGACAATGTCTTTGCCAATGTCAAAATAAATGTAGGAGAGATTTTAAGTATTGATGAGAAACTTGAAAAGTATAC
TGAGACGACACATTAGTCTA

Downstream 100 bases:

>100_bases
AATAGAGCGTTTTTGAAAAAGAAAAGAGGAAATCAAAATGAAGAAAACATGGAAAGTGTTTTTAACGCTTGTAACAGCTC
TTGTAGCTGTTGTGCTTGTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACLMAVLMDSLTWLNDLI
YPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVS
LPYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVDISEKYVIKWKRT

Sequences:

>Translated_238_residues
MGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACLMAVLMDSLTWLNDLI
YPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVS
LPYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVDISEKYVIKWKRT
>Mature_237_residues
GFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGVLIACLMAVLMDSLTWLNDLIY
PMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTFPIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSL
PYFYAGLRVSVSYAFITTVVSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVDISEKYVIKWKRT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=239, Percent_Identity=24.6861924686192, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786564, Length=203, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27191; Mature: 27059

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTV
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVDISEKYVIKWKRT
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECC
>Mature Secondary Structure 
GFLGVLSIWQLAGFLKLLPKFILPTPLEILQPFVRDREFLWHHSWATLRVALLGLILGV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIACLMAVLMDSLTWLNDLIYPMMVVIQTIPTIAIAPILVLWLGYGILPKIVLIILTTTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIIVSILDGFRHCDKDMLTLFSLMRANPWQILWHFKIPVSLPYFYAGLRVSVSYAFITTV
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
VSEWLGGFEGLGVYMIQSKKLFQYDTMFAIIILVSIISLLGMKLVDISEKYVIKWKRT
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]