| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515840
Identifier: 116515840
GI number: 116515840
Start: 1061769
End: 1064303
Strand: Reverse
Name: 116515840
Synonym: SPD_1037
Alternate gene names: NA
Gene position: 1064303-1061769 (Counterclockwise)
Preceding gene: 116517004
Following gene: 116516920
Centisome position: 52.02
GC content: 41.34
Gene sequence:
>2535_bases ATGAAAATCAATAAAAAATATCTAGCTGGGTCAGTAGCTACACTTGTTTTAAGTGTCTGTGCTTATGAACTAGGTTTGCA TCAAGCTCAAACTGTAAAAGAAAATAATCGTGTTTCCTATATAGATGGAAAACAAGCGACGCAAAAAACGGAGAATTTGA CTCCTGATGAGGTTAGCAAGCGTGAAGGAATCAATGCCGAACAAATCGTCATCAAAATAACAGACCAAGGCTATGTCACT TCACATGGGGACCACTATCATTATTACAATGGTAAGGTTCCTTATGACGCTATCATCAGTGAAGAATTGCTGATGAAGGA TCCAAACTACCAGCTAAAGGACGAGGATATTATCAGTGAAATCAAGGGTGGTTATGTGATTAAGGTAGATGGAAAATACT ATGTTTACCTTAAGGATGCAGCTCATGCGGATAATGTCCGTACAAAAGAAGAAATCAATCGACAAAAACAAGAGCATAGT CAACATCGTGAAGGTGGGACTCCAAGAAACGATGGTGCTGTTGCCTTGGCACGTTCACAGGGACGCTACACCACAGATGA TGGTTATATCTTTAATGCTTCTGATATCATTGAAGATACTGGTGATGCTTATATCGTTCCTCACGGCGACCATTACCATT ACATTCCTAAGAATGAGTTATCAGCTAGCGAGTTAGCTGCTGCAAAAGCCTTCCTATCTGGTCGGGGAAATCTGTCAAAT TCAAGAACCTATCGCCGACAAAATAGCGATAACACTTCAAGAACAAACTGGGTACCTTCTGTAAGCAATCCAGGAACTAC AAATACTAACACAAGCAACAACAGCAACACTAACAGTCAAGCAAGTCAAAGTAATGACATTGATAGTCTCTTGAAACAGC TCTACAAACTGCCTTTGAGTCAACGCCATGTAGAATCTGATGGCCTTATTTTCGACCCAGCGCAAATCACAAGTCGAACC GCCAATGGTGTTGCTGTACCGCACGGAGACCATTATCACTTTATTCCTTATTCACAACTGTCACCTTTGGAAGAAAAATT GGCTCGTATTATTCCCCTTCGTTATCGTTCAAACCATTGGGTACCAGATTCAAGACCAGAACAACCAAGTCCACAATCGA CTCCGGAACCTAGTCCAAGTCCGCAACCTGCACCAAATCCTCAACCAGCTCCAAGCAATCCAATTGATGAGAAATTGGTC AAAGAAGCTGTTCGAAAAGTAGGCGATGGTTATGTCTTTGAGGAGAATGGAGTTCCTCGTTATATCCCAGCCAAGGATCT TTCAGCAGAAACAGCAGCAGGCATTGATAGCAAACTGGCCAAGCAGGAAAGTTTATCTCATAAGCTAGGAGCTAAGAAAA CTGACCTCCCATCTAGTGATAGAGAATTTTACAATAAGGCTTATGACTTACTAGCAAGAATTCATCAAGATTTACTTGAT AATAAAGGTCGACAAGTTGATTTTGAGGCTTTGGATAACCTGTTGGAACGACTCAAGGATGTCTCAAGTGATAAAGTCAA GTTAGTGGATGATATTCTTGCCTTCTTAGCTCCGATTCGTCATCCAGAACGTTTAGGAAAACCAAATGCGCAAATTACCT ACACTGATGATGAGATTCAAGTAGCCAAGTTGGCAGGCAAGTACACAACAGAAGACGGTTATATCTTTGATCCTCGTGAT ATAACCAGTGATGAGGGGGATGCCTATGTAACTCCACATATGACCCATAGCCACTGGATTAAAAAAGATAGTTTGTCTGA AGCTGAGAGAGCGGCAGCCCAGGCTTATGCTAAAGAGAAAGGTTTGACCCCTCCTTCGACAGACCATCAGGATTCAGGAA ATACTGAGGCAAAAGGAGCAGAAGCTATCTACAACCGCGTGAAAGCAGCTAAGAAGGTGCCACTTGATCGTATGCCTTAC AATCTTCAATATACTGTAGAAGTCAAAAACGGTAGTTTAATCATACCTCATTATGACCATTACCATAACATCAAATTTGA GTGGTTTGACGAAGGCCTTTATGAGGCACCTAAGGGGTATAGTCTTGAGGATCTTTTGGCGACTGTCAAGTACTATGTCG AACATCCAAACGAACGTCCGCATTCAGATAATGGTTTTGGTAACGCTAGCGACCATGTTCAAAGAAACAAAAATGGTCAA GCTGATACCAATCAAACGGAAAAACCAAACGAGGAGAAACCTCAGACAGAAAAACCTGAGGAAGAAACCCCTCGAGAAGA GAAACCGCAAAGCGAGAAACCAGAGTCTCCAAAACCAACAGAGGAACCAGAAGAAGAATCACCAGAAGAATCACCAGAGG AATCAGAAGAACCTCAGGTCGAGACTGAAAAGGTTAAAGAAAAACTGAGAGAGGCTGAAGATTTACTTGGAAAAATCCAG AATCCAATTATCAAGTCCAATGCCAAAGAGACTCTCACAGGATTAAAAAATAATTTACTATTTGGCACCCAGGACAACAA TACTATTATGGCAGAAGCTGAAAAACTATTGGCTTTATTAAAGGAGAGTAAGTAA
Upstream 100 bases:
>100_bases TTCTTGACAAGCAATATTAAAAAGAGTAAACTATTAACTAGTTAATTAACCGGTTTATTACTTTATAGTGAATCAAATAT ACTTAAGAAAAGAGGAAAGA
Downstream 100 bases:
>100_bases AGGTAGCAGCATTTTCTAACTCCTAAAAACAGGATAGGAGAACGGGAAAACGAAAAATGAGAGCAGAATGTGAGTTCTAG TTCTCATTTTTTTTATGAAA
Product: histidine triad protein
Products: NA
Alternate protein names: Pneumococcal Histidine Triad Protein B; Histidine Triad Family Protein; Pneumococcal Histidine Triad Protein A; Histidine Triad Protein; Pneumococcal Histidine Triad A Protein; Pneumococcal Histidine Triad Protein D ; Pneumococcal Histidine Triad Protein D; Pneumococcal Histidine Triad Protein E; Histidine-Rich Glycoprotein; Histidine Motif-Containing Protein; Lipoprotein; Streptococcal Histidine Triad Family Protein
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MKINKKYLAGSVATLVLSVCAYELGLHQAQTVKENNRVSYIDGKQATQKTENLTPDEVSKREGINAEQIVIKITDQGYVT SHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIISEIKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHS QHREGGTPRNDGAVALARSQGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLSN SRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLSQRHVESDGLIFDPAQITSRT ANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNHWVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLV KEAVRKVGDGYVFEENGVPRYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLLD NKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEIQVAKLAGKYTTEDGYIFDPRD ITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKEKGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPY NLQYTVEVKNGSLIIPHYDHYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQ ADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQVETEKVKEKLREAEDLLGKIQ NPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLALLKESK
Sequences:
>Translated_844_residues MKINKKYLAGSVATLVLSVCAYELGLHQAQTVKENNRVSYIDGKQATQKTENLTPDEVSKREGINAEQIVIKITDQGYVT SHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIISEIKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHS QHREGGTPRNDGAVALARSQGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLSN SRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLSQRHVESDGLIFDPAQITSRT ANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNHWVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLV KEAVRKVGDGYVFEENGVPRYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLLD NKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEIQVAKLAGKYTTEDGYIFDPRD ITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKEKGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPY NLQYTVEVKNGSLIIPHYDHYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQ ADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQVETEKVKEKLREAEDLLGKIQ NPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLALLKESK >Mature_844_residues MKINKKYLAGSVATLVLSVCAYELGLHQAQTVKENNRVSYIDGKQATQKTENLTPDEVSKREGINAEQIVIKITDQGYVT SHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIISEIKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHS QHREGGTPRNDGAVALARSQGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLSN SRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLSQRHVESDGLIFDPAQITSRT ANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNHWVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLV KEAVRKVGDGYVFEENGVPRYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLLD NKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEIQVAKLAGKYTTEDGYIFDPRD ITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKEKGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPY NLQYTVEVKNGSLIIPHYDHYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQ ADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQVETEKVKEKLREAEDLLGKIQ NPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLALLKESK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94716; Mature: 94716
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINKKYLAGSVATLVLSVCAYELGLHQAQTVKENNRVSYIDGKQATQKTENLTPDEVSK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCHHHHHH REGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIISE HCCCCCEEEEEEEECCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH IKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHSQHREGGTPRNDGAVALARSQ HCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC GRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLSN CCEECCCCEEECHHHHHHCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCC SRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLS CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH QRHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNHW HHHCCCCCEEECHHHHHHCCCCCEECCCCCCEEECCHHHCCHHHHHHHHHCCCEECCCCC VPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCC YIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLLD CCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEIQ CCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCEE VAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKEK EEHHCCCEECCCCEEECCCCCCCCCCCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHC GLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYDH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCCC YHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQ CCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCC ADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ETEKVKEKLREAEDLLGKIQNPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLALL HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHH KESK HCCC >Mature Secondary Structure MKINKKYLAGSVATLVLSVCAYELGLHQAQTVKENNRVSYIDGKQATQKTENLTPDEVSK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCHHHHHH REGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIISE HCCCCCEEEEEEEECCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH IKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHSQHREGGTPRNDGAVALARSQ HCCCEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC GRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLSN CCEECCCCEEECHHHHHHCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCC SRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPLS CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH QRHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNHW HHHCCCCCEEECHHHHHHCCCCCEECCCCCCEEECCHHHCCHHHHHHHHHCCCEECCCCC VPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCC YIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLLD CCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEIQ CCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCEE VAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKEK EEHHCCCEECCCCEEECCCCCCCCCCCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHC GLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYDH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECCCCC YHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQ CCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCC ADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ETEKVKEKLREAEDLLGKIQNPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLALL HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHH KESK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA