Click here to switch to the map view.

The map label for this gene is yrbG [H]

Identifier: 116515837

GI number: 116515837

Start: 1639635

End: 1640165

Strand: Reverse

Name: yrbG [H]

Synonym: SPD_1623

Alternate gene names: 116515837

Gene position: 1640165-1639635 (Counterclockwise)

Preceding gene: 116515487

Following gene: 116515751

Centisome position: 80.16

GC content: 41.43

Gene sequence:

>531_bases
ATGACACTTAATTATATCGAAATTTTAATCAAACTGGTCTTGACTCTCAAATGGCTCAACAACAATGTTCACTTTGTGAA
ACGTTTGATTGATGGTAAGCCAACTCTCCTTATCAAAAATGGGAATATTGACCCAGAAGCCTGTCGTTCAGTTGGTTTGT
CTGCATCGGATGTAGCCCTCAAACTTCGTAGCCAAGGGATTTTCCAGATGAAGCAAGTCAAACGAGCTGTGCAAGAGCAA
AATGGGCAACTTATCGTTGTGCAAATGGGAGATGAAAATCCTAAGTATCCAGTTGTGACTGACGGTGTGATTCAAGTAGA
TGTCTTGGAATCGATTGGTCGTAGCGAAGAGTGGTTGCTTGATAACCTCAGTAAACAAGGGCATGACAATGTAGCCAATA
TCTTTATTGCTGAATATGACAAGGGTGCTGTTACAGTCGTAACTTATGAAAAAGAAAAACCTGGGGTCTTGTACTCTTCG
AAAATCTCTTCAAACCGCGTCAACGTCGCCTTGCCGTATGTAGGTTACTGA

Upstream 100 bases:

>100_bases
GCTATTATCGTGCCCTAAACGGAAGTGAGCCAGACAAGTACCTGTTAGAGAAAGTCGAATTGTATAAGACAGACGCAATT
GAACTGGTGGATGTGAACAA

Downstream 100 bases:

>100_bases
CTTCGTCAGTTCTATCTACAACCTCAAAGCAGTGCTTTGAGCAGCCTGCGGCTAGTTTCCTAGTTTGCTCTTTGATTTTC
ATTGAGTATTGGCCTCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTLNYIEILIKLVLTLKWLNNNVHFVKRLIDGKPTLLIKNGNIDPEACRSVGLSASDVALKLRSQGIFQMKQVKRAVQEQ
NGQLIVVQMGDENPKYPVVTDGVIQVDVLESIGRSEEWLLDNLSKQGHDNVANIFIAEYDKGAVTVVTYEKEKPGVLYSS
KISSNRVNVALPYVGY

Sequences:

>Translated_176_residues
MTLNYIEILIKLVLTLKWLNNNVHFVKRLIDGKPTLLIKNGNIDPEACRSVGLSASDVALKLRSQGIFQMKQVKRAVQEQ
NGQLIVVQMGDENPKYPVVTDGVIQVDVLESIGRSEEWLLDNLSKQGHDNVANIFIAEYDKGAVTVVTYEKEKPGVLYSS
KISSNRVNVALPYVGY
>Mature_175_residues
TLNYIEILIKLVLTLKWLNNNVHFVKRLIDGKPTLLIKNGNIDPEACRSVGLSASDVALKLRSQGIFQMKQVKRAVQEQN
GQLIVVQMGDENPKYPVVTDGVIQVDVLESIGRSEEWLLDNLSKQGHDNVANIFIAEYDKGAVTVVTYEKEKPGVLYSSK
ISSNRVNVALPYVGY

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 19643; Mature: 19512

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNYIEILIKLVLTLKWLNNNVHFVKRLIDGKPTLLIKNGNIDPEACRSVGLSASDVAL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHEE
KLRSQGIFQMKQVKRAVQEQNGQLIVVQMGDENPKYPVVTDGVIQVDVLESIGRSEEWLL
EEHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCEEEEEHHHHCCCCHHHHH
DNLSKQGHDNVANIFIAEYDKGAVTVVTYEKEKPGVLYSSKISSNRVNVALPYVGY
HHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TLNYIEILIKLVLTLKWLNNNVHFVKRLIDGKPTLLIKNGNIDPEACRSVGLSASDVAL
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHEE
KLRSQGIFQMKQVKRAVQEQNGQLIVVQMGDENPKYPVVTDGVIQVDVLESIGRSEEWLL
EEHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCEEEEEHHHHCCCCHHHHH
DNLSKQGHDNVANIFIAEYDKGAVTVVTYEKEKPGVLYSSKISSNRVNVALPYVGY
HHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]