Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

Click here to switch to the map view.

The map label for this gene is 116515829

Identifier: 116515829

GI number: 116515829

Start: 1193027

End: 1194436

Strand: Reverse

Name: 116515829

Synonym: SPD_1166

Alternate gene names: NA

Gene position: 1194436-1193027 (Counterclockwise)

Preceding gene: 116515706

Following gene: 116515484

Centisome position: 58.38

GC content: 34.47

Gene sequence:

>1410_bases
ATGAAATTAAATAAAAAAATATATTTCTTTGATAAAGGAATTTTTAATCCTTATCGAATGAGTAATGTAAAATTAAAAGT
TAATCAGGCAGTAAAGGATAAAGAAATTTTCTTCACTGAGGAAAAACCATGGGAAATTCGTTTTGATAACAGTTATCCAA
ATGTTTTCTTTGATGATTTAGCAGGTGTTTATCGTTGCTACTATTCTACATTTACTGATGATGAGGAGTCTGAAAAATAC
TCTTTAGAGGAGCGTAAGGAACGTCAATATCTACCTCGTGCGAAGCGTATTGTTTCACTTTGTTATGCTGAAAGTAAAGA
TGGTGTTAACTGGGTGAAACCAAATCTAGGTATTACAGAATTTCGAGGATCAACTGAAAATAATATTATCGGACATTTTT
TACATGGTACATCTGTTTTTCTAGATAAACATGACGCAGATGAAAATCGTCGTTATAAAATGTTTACAAAGATTGATTAC
GGTAACGGTGTTCATTTCATTGCTGTAGCATTTTCAAAAGATGGTCTACACTTTGATGAATACATTAAAGTACCAAACTT
CAATCCACGTGCAGACACTCATAACCATATCATATATGATGAAGCATTAAATCGCTATGTGCTAATTACTCGTACTTGGA
GAGATTCATTGCGCTTGCCGTGTGTATCTACGAGTGCTGATTTCATTAACTGGACTCCAATTCAAGAAATTTTGAATGTC
TGTGATTATGAAAATCAAATTTATTCTATGCCTATTTTTAAACGTGGCGATTATATACTAGGTTTAGCTTCAGTTTTCCA
TGAAGGAGATCAACTGAACAAGAATTACGATACAGTGGACCTTCAATTGACTTATAGTTATCGTCATGTTGGTTGGCATT
ATCTAAACACTGATACTCCACTTATTCCTCGTGGTAAAGGTCAATATGGTGATGGAGAATTTGACTGTGGATGCATCTAT
TCTTCTGCACCAGTTACTATCGGTGACCGTACTTATTTCTACTACATGGGAGGAAATGGACAACATACAAACTTCCGTGA
AACAAGCTTGTCTCGTGCTTATATTGAGAAAGATCACTTTGCATATTGGGATACTAAACGTCCAGAATATCCAGGTGTTT
TGTATACCAATGGATTTATTTTCCTCAATGATCAAGTTTACCTTGATGCAGATATTGCAGCTGGAGGCTTTGTAACAATT
GAATTGTTCGAGAATAATCACACTCCAATGGAAATTACAGCTTCCCTTGAAAAAATAGAAGATGGTCGCTATCAAGTGTT
ATTCAGCGAACCTTTACCTCGAACTCAAACTCGACTGAAAATTAGCTTTAAAAATGCTAAAATCTACGCAATCGAAGGAA
ATTTAGATATTTTCAGAATTGAATCAGACAATGCTCTATTGAGGGGGTAA

Upstream 100 bases:

>100_bases
ACAGTACCATGAATTTTATGATGAAGATGGTCGTGCTTATGATCTTAAGCAGGTTTCACCAACACATTTTGTAGCGTTAA
AACCAGAATAGGTGGTAAAT

Downstream 100 bases:

>100_bases
GATTATGAAATATGATTTATATGATAATTGTATTGAACTTCTAAAAGAACGCGAAGTTACAATTGAAGATATGGCAGCGT
TAGTAATATTTTCACAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY
SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY
GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV
CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY
SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI
ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG

Sequences:

>Translated_469_residues
MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY
SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY
GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV
CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY
SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI
ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG
>Mature_469_residues
MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY
SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY
GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV
CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY
SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI
ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54802; Mature: 54802

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDL
CCCCCEEEEEECCCCCCEEECEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCEEHHHH
AGVYRCYYSTFTDDEESEKYSLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITE
HHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECCCCCEEE
FRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDYGNGVHFIAVAFSKDGLHFDE
ECCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCHHH
YIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV
EEECCCCCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCEEECCCCCEECCCHHHHHHH
CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTP
HCCCCCEEECCEEECCCEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEEECEEEEECCCCC
LIPRGKGQYGDGEFDCGCIYSSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHF
CCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEEECCCCCCCCCHHHCCHHHHHCCCCE
AYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTIELFENNHTPMEITASLEKIE
EEECCCCCCCCEEEEECCEEEECCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCC
DGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG
CCCEEEEECCCCCCCCEEEEEEEECEEEEEEECCEEEEEEECCCCEECC
>Mature Secondary Structure
MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDL
CCCCCEEEEEECCCCCCEEECEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCEEHHHH
AGVYRCYYSTFTDDEESEKYSLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITE
HHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECCCCCEEE
FRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDYGNGVHFIAVAFSKDGLHFDE
ECCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCHHH
YIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV
EEECCCCCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCEEECCCCCEECCCHHHHHHH
CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTP
HCCCCCEEECCEEECCCEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEEECEEEEECCCCC
LIPRGKGQYGDGEFDCGCIYSSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHF
CCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEEECCCCCCCCCHHHCCHHHHHCCCCE
AYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTIELFENNHTPMEITASLEKIE
EEECCCCCCCCEEEEECCEEEECCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCC
DGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG
CCCEEEEECCCCCCCCEEEEEEEECEEEEEEECCEEEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA