| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515829
Identifier: 116515829
GI number: 116515829
Start: 1193027
End: 1194436
Strand: Reverse
Name: 116515829
Synonym: SPD_1166
Alternate gene names: NA
Gene position: 1194436-1193027 (Counterclockwise)
Preceding gene: 116515706
Following gene: 116515484
Centisome position: 58.38
GC content: 34.47
Gene sequence:
>1410_bases ATGAAATTAAATAAAAAAATATATTTCTTTGATAAAGGAATTTTTAATCCTTATCGAATGAGTAATGTAAAATTAAAAGT TAATCAGGCAGTAAAGGATAAAGAAATTTTCTTCACTGAGGAAAAACCATGGGAAATTCGTTTTGATAACAGTTATCCAA ATGTTTTCTTTGATGATTTAGCAGGTGTTTATCGTTGCTACTATTCTACATTTACTGATGATGAGGAGTCTGAAAAATAC TCTTTAGAGGAGCGTAAGGAACGTCAATATCTACCTCGTGCGAAGCGTATTGTTTCACTTTGTTATGCTGAAAGTAAAGA TGGTGTTAACTGGGTGAAACCAAATCTAGGTATTACAGAATTTCGAGGATCAACTGAAAATAATATTATCGGACATTTTT TACATGGTACATCTGTTTTTCTAGATAAACATGACGCAGATGAAAATCGTCGTTATAAAATGTTTACAAAGATTGATTAC GGTAACGGTGTTCATTTCATTGCTGTAGCATTTTCAAAAGATGGTCTACACTTTGATGAATACATTAAAGTACCAAACTT CAATCCACGTGCAGACACTCATAACCATATCATATATGATGAAGCATTAAATCGCTATGTGCTAATTACTCGTACTTGGA GAGATTCATTGCGCTTGCCGTGTGTATCTACGAGTGCTGATTTCATTAACTGGACTCCAATTCAAGAAATTTTGAATGTC TGTGATTATGAAAATCAAATTTATTCTATGCCTATTTTTAAACGTGGCGATTATATACTAGGTTTAGCTTCAGTTTTCCA TGAAGGAGATCAACTGAACAAGAATTACGATACAGTGGACCTTCAATTGACTTATAGTTATCGTCATGTTGGTTGGCATT ATCTAAACACTGATACTCCACTTATTCCTCGTGGTAAAGGTCAATATGGTGATGGAGAATTTGACTGTGGATGCATCTAT TCTTCTGCACCAGTTACTATCGGTGACCGTACTTATTTCTACTACATGGGAGGAAATGGACAACATACAAACTTCCGTGA AACAAGCTTGTCTCGTGCTTATATTGAGAAAGATCACTTTGCATATTGGGATACTAAACGTCCAGAATATCCAGGTGTTT TGTATACCAATGGATTTATTTTCCTCAATGATCAAGTTTACCTTGATGCAGATATTGCAGCTGGAGGCTTTGTAACAATT GAATTGTTCGAGAATAATCACACTCCAATGGAAATTACAGCTTCCCTTGAAAAAATAGAAGATGGTCGCTATCAAGTGTT ATTCAGCGAACCTTTACCTCGAACTCAAACTCGACTGAAAATTAGCTTTAAAAATGCTAAAATCTACGCAATCGAAGGAA ATTTAGATATTTTCAGAATTGAATCAGACAATGCTCTATTGAGGGGGTAA
Upstream 100 bases:
>100_bases ACAGTACCATGAATTTTATGATGAAGATGGTCGTGCTTATGATCTTAAGCAGGTTTCACCAACACATTTTGTAGCGTTAA AACCAGAATAGGTGGTAAAT
Downstream 100 bases:
>100_bases GATTATGAAATATGATTTATATGATAATTGTATTGAACTTCTAAAAGAACGCGAAGTTACAATTGAAGATATGGCAGCGT TAGTAATATTTTCACAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG
Sequences:
>Translated_469_residues MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG >Mature_469_residues MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDLAGVYRCYYSTFTDDEESEKY SLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITEFRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDY GNGVHFIAVAFSKDGLHFDEYIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTPLIPRGKGQYGDGEFDCGCIY SSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHFAYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTI ELFENNHTPMEITASLEKIEDGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54802; Mature: 54802
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDL CCCCCEEEEEECCCCCCEEECEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCEEHHHH AGVYRCYYSTFTDDEESEKYSLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITE HHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECCCCCEEE FRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDYGNGVHFIAVAFSKDGLHFDE ECCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCHHH YIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV EEECCCCCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCEEECCCCCEECCCHHHHHHH CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTP HCCCCCEEECCEEECCCEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEEECEEEEECCCCC LIPRGKGQYGDGEFDCGCIYSSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHF CCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEEECCCCCCCCCHHHCCHHHHHCCCCE AYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTIELFENNHTPMEITASLEKIE EEECCCCCCCCEEEEECCEEEECCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCC DGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG CCCEEEEECCCCCCCCEEEEEEEECEEEEEEECCEEEEEEECCCCEECC >Mature Secondary Structure MKLNKKIYFFDKGIFNPYRMSNVKLKVNQAVKDKEIFFTEEKPWEIRFDNSYPNVFFDDL CCCCCEEEEEECCCCCCEEECEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCEEHHHH AGVYRCYYSTFTDDEESEKYSLEERKERQYLPRAKRIVSLCYAESKDGVNWVKPNLGITE HHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEECCCCCEEE FRGSTENNIIGHFLHGTSVFLDKHDADENRRYKMFTKIDYGNGVHFIAVAFSKDGLHFDE ECCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCHHH YIKVPNFNPRADTHNHIIYDEALNRYVLITRTWRDSLRLPCVSTSADFINWTPIQEILNV EEECCCCCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCEEECCCCCEECCCHHHHHHH CDYENQIYSMPIFKRGDYILGLASVFHEGDQLNKNYDTVDLQLTYSYRHVGWHYLNTDTP HCCCCCEEECCEEECCCEEEEHHHHHCCCCCCCCCCCEEEEEEEEEEEECEEEEECCCCC LIPRGKGQYGDGEFDCGCIYSSAPVTIGDRTYFYYMGGNGQHTNFRETSLSRAYIEKDHF CCCCCCCCCCCCCEEEEEEECCCCEEECCEEEEEEECCCCCCCCCHHHCCHHHHHCCCCE AYWDTKRPEYPGVLYTNGFIFLNDQVYLDADIAAGGFVTIELFENNHTPMEITASLEKIE EEECCCCCCCCEEEEECCEEEECCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEHHHCC DGRYQVLFSEPLPRTQTRLKISFKNAKIYAIEGNLDIFRIESDNALLRG CCCEEEEECCCCCCCCEEEEEEEECEEEEEEECCEEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA