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The map label for this gene is pyrC [H]

Identifier: 116515810

GI number: 116515810

Start: 1056591

End: 1057859

Strand: Reverse

Name: pyrC [H]

Synonym: SPD_1030

Alternate gene names: 116515810

Gene position: 1057859-1056591 (Counterclockwise)

Preceding gene: 116515668

Following gene: 116517066

Centisome position: 51.7

GC content: 43.81

Gene sequence:

>1269_bases
ATGCTACTAATCAAAAATGGTCGTGTAATGGATCCCAAGTCTGGTTTGGATCAAGTTTGTGATGTCTTAGTTCAAGATGG
GAAAATTATCAAAATTGCGCCTGAGATCACGGAAGAAGGAGCAGAAACGATTGATGCTACTGGTCATGTGGTTGCTCCTG
GTTTGGTCGATATTCATGTGCATTTCCGTGAACCTGGTCAAACACATAAAGAAGACATTCATACTGGTGCCCTGGCAGCC
GCTGCAGGTGGTTTTACTACTGTCGTCATGATGGCTAATACCAGTCCAACCATTTCAGACGTGGAGACTTTGCAAGCAGT
TCTCCAGTCAGCTGCCAAAGAGAAGATTAATGTCAAGACAGTTGCGACCATTACTAAAAACTTTAATGGTAAAAACTTGA
CTGACTTTAAGGCACTCTTAGAAGCTGGTGCGGTTGGTTTCTCTGATGACGGTATTCCGCTTGAGAGCAGTAAGATTGTC
AAGGAAGCCATGGAGGAAGCCAAAAAACTCAATACCTTTATCAGCCTTCATGAGGAAGATCCAGGTTTGAACGGTGTTCT
TGGCTTTAATGAAAATATTGCTAGAGAACATTTCCATATCTGCGGTGCTACTGGGGTGGCTGAGTACGCTATGATGGCGC
GTGATGTCATGATTGCCTATGCAACTAAAGCCCATGTTCACATCCAGCATTTGTCTAAGGAAGAAAGTGTTAAAGTAGTG
GAGTTTGCTCAGGGGTTAGGTGCAGAAGTCACAGCAGAAGTAGCGCCACAGCATTTCTCTAAGACAGAAGCACTTCTTTT
AACACAAGGTAGCAATGCTAAGATGAATCCACCGCTTCGTTTGGAATCAGACCGTCGTGCCGTTATCGAAGGTCTCAAAT
CAGGTGTCATCACAGTTATTGCGACTGACCACGCGCCTCATCATGTAGATGAAAAAAATGTTGAGGATATTACCAAAGCG
CCATCTGGTATGACTGGCTTAGAAACATCCCTGTCTCTCGGCTTGACCTATTTAGTAGAAGCTGGTGAGTTGAGCTTGAT
GGAATTACTTGAAAAAATGACATACAACCCAGCCAAGCTTTACAACTTTGAAGCAGGTTACTTGGCTGAGAATGGTCCAG
CAGATATCACTATTTTTGATGCCAAGGCTGACCGCCTTGTGGACTCCCATTTTGCTTCCAAAGCAGCTAATTCACCATTC
ATCGGTGAAACCTTAAAAGGGCAGGTTAAATATACCATCTGTAAGGGACAAATCGTCTATCAAGCTTGA

Upstream 100 bases:

>100_bases
GCTTTTAGAGGATAAACCCTTCTTTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCT
ATGAATAAAGGAGAAAGCAG

Downstream 100 bases:

>100_bases
TAGGAGTTAGAATATGAATTATTTTCGAAAACGTAGGGAGAGACAAGCGAAATCTAATAGTGGAATTTACTGTCCCGCAG
CTAATCGTTCCAAAATTCAA

Product: dihydroorotase

Products: NA

Alternate protein names: DHOase [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLLIKNGRVMDPKSGLDQVCDVLVQDGKIIKIAPEITEEGAETIDATGHVVAPGLVDIHVHFREPGQTHKEDIHTGALAA
AAGGFTTVVMMANTSPTISDVETLQAVLQSAAKEKINVKTVATITKNFNGKNLTDFKALLEAGAVGFSDDGIPLESSKIV
KEAMEEAKKLNTFISLHEEDPGLNGVLGFNENIAREHFHICGATGVAEYAMMARDVMIAYATKAHVHIQHLSKEESVKVV
EFAQGLGAEVTAEVAPQHFSKTEALLLTQGSNAKMNPPLRLESDRRAVIEGLKSGVITVIATDHAPHHVDEKNVEDITKA
PSGMTGLETSLSLGLTYLVEAGELSLMELLEKMTYNPAKLYNFEAGYLAENGPADITIFDAKADRLVDSHFASKAANSPF
IGETLKGQVKYTICKGQIVYQA

Sequences:

>Translated_422_residues
MLLIKNGRVMDPKSGLDQVCDVLVQDGKIIKIAPEITEEGAETIDATGHVVAPGLVDIHVHFREPGQTHKEDIHTGALAA
AAGGFTTVVMMANTSPTISDVETLQAVLQSAAKEKINVKTVATITKNFNGKNLTDFKALLEAGAVGFSDDGIPLESSKIV
KEAMEEAKKLNTFISLHEEDPGLNGVLGFNENIAREHFHICGATGVAEYAMMARDVMIAYATKAHVHIQHLSKEESVKVV
EFAQGLGAEVTAEVAPQHFSKTEALLLTQGSNAKMNPPLRLESDRRAVIEGLKSGVITVIATDHAPHHVDEKNVEDITKA
PSGMTGLETSLSLGLTYLVEAGELSLMELLEKMTYNPAKLYNFEAGYLAENGPADITIFDAKADRLVDSHFASKAANSPF
IGETLKGQVKYTICKGQIVYQA
>Mature_422_residues
MLLIKNGRVMDPKSGLDQVCDVLVQDGKIIKIAPEITEEGAETIDATGHVVAPGLVDIHVHFREPGQTHKEDIHTGALAA
AAGGFTTVVMMANTSPTISDVETLQAVLQSAAKEKINVKTVATITKNFNGKNLTDFKALLEAGAVGFSDDGIPLESSKIV
KEAMEEAKKLNTFISLHEEDPGLNGVLGFNENIAREHFHICGATGVAEYAMMARDVMIAYATKAHVHIQHLSKEESVKVV
EFAQGLGAEVTAEVAPQHFSKTEALLLTQGSNAKMNPPLRLESDRRAVIEGLKSGVITVIATDHAPHHVDEKNVEDITKA
PSGMTGLETSLSLGLTYLVEAGELSLMELLEKMTYNPAKLYNFEAGYLAENGPADITIFDAKADRLVDSHFASKAANSPF
IGETLKGQVKYTICKGQIVYQA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG0044

COG function: function code F; Dihydroorotase and related cyclic amidohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHOase family. Type 2 subfamily [H]

Homologues:

Organism=Homo sapiens, GI18105007, Length=375, Percent_Identity=32.5333333333333, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI4503375, Length=455, Percent_Identity=25.4945054945055, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI4503051, Length=462, Percent_Identity=24.025974025974, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI62422571, Length=464, Percent_Identity=24.3534482758621, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1786722, Length=438, Percent_Identity=28.310502283105, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI87082175, Length=455, Percent_Identity=26.1538461538462, Blast_Score=115, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI193204318, Length=369, Percent_Identity=31.4363143631436, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI86575075, Length=444, Percent_Identity=25.4504504504505, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17539558, Length=464, Percent_Identity=26.9396551724138, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322218, Length=428, Percent_Identity=29.2056074766355, Blast_Score=129, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24642586, Length=380, Percent_Identity=29.7368421052632, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI18859883, Length=407, Percent_Identity=27.027027027027, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR004722
- InterPro:   IPR002195
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.2.3 [H]

Molecular weight: Translated: 45325; Mature: 45325

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00482 DIHYDROOROTASE_1 ; PS00483 DIHYDROOROTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIKNGRVMDPKSGLDQVCDVLVQDGKIIKIAPEITEEGAETIDATGHVVAPGLVDIHV
CEEECCCCEECCCCCHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCEECCCEEEEEE
HFREPGQTHKEDIHTGALAAAAGGFTTVVMMANTSPTISDVETLQAVLQSAAKEKINVKT
EECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
VATITKNFNGKNLTDFKALLEAGAVGFSDDGIPLESSKIVKEAMEEAKKLNTFISLHEED
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCC
PGLNGVLGFNENIAREHFHICGATGVAEYAMMARDVMIAYATKAHVHIQHLSKEESVKVV
CCCCEEECCCCCHHHHHHEEECCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCHHH
EFAQGLGAEVTAEVAPQHFSKTEALLLTQGSNAKMNPPLRLESDRRAVIEGLKSGVITVI
HHHCCCCCCEEHHHCHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCEEEEE
ATDHAPHHVDEKNVEDITKAPSGMTGLETSLSLGLTYLVEAGELSLMELLEKMTYNPAKL
EECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHE
YNFEAGYLAENGPADITIFDAKADRLVDSHFASKAANSPFIGETLKGQVKYTICKGQIVY
EECCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEE
QA
EC
>Mature Secondary Structure
MLLIKNGRVMDPKSGLDQVCDVLVQDGKIIKIAPEITEEGAETIDATGHVVAPGLVDIHV
CEEECCCCEECCCCCHHHHHHHHHCCCCEEEECCHHHHCCHHHCCCCCCEECCCEEEEEE
HFREPGQTHKEDIHTGALAAAAGGFTTVVMMANTSPTISDVETLQAVLQSAAKEKINVKT
EECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
VATITKNFNGKNLTDFKALLEAGAVGFSDDGIPLESSKIVKEAMEEAKKLNTFISLHEED
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCC
PGLNGVLGFNENIAREHFHICGATGVAEYAMMARDVMIAYATKAHVHIQHLSKEESVKVV
CCCCEEECCCCCHHHHHHEEECCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCHHH
EFAQGLGAEVTAEVAPQHFSKTEALLLTQGSNAKMNPPLRLESDRRAVIEGLKSGVITVI
HHHCCCCCCEEHHHCHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCEEEEE
ATDHAPHHVDEKNVEDITKAPSGMTGLETSLSLGLTYLVEAGELSLMELLEKMTYNPAKL
EECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHE
YNFEAGYLAENGPADITIFDAKADRLVDSHFASKAANSPFIGETLKGQVKYTICKGQIVY
EECCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEE
QA
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]