Click here to switch to the map view.

The map label for this gene is 116515797

Identifier: 116515797

GI number: 116515797

Start: 1556045

End: 1556242

Strand: Reverse

Name: 116515797

Synonym: SPD_1533

Alternate gene names: NA

Gene position: 1556242-1556045 (Counterclockwise)

Preceding gene: 116516718

Following gene: 116517116

Centisome position: 76.06

GC content: 26.77

Gene sequence:

>198_bases
ATGCAAGCCTTTTATGTTAAAAAAGAGGAAAAACTGTCAAACGATTATCATAAAATAAATACAGGAAATCAATCAAATTT
TTACGAAAATGTGAAAGATAATGAAATAAAAGACTTTTTAACCAAGGTTTCAAACTTATTTTTCAAGGAATTCCTGATGA
AACAGTCAAAAACAATCAATCTAAAACTTGCCCACTAA

Upstream 100 bases:

>100_bases
CGTCCAATCTTGATAAAGTCTGTAACGACGCTCAGTTGTCCATTCCATTCATTCCTCCAAAAATCTTATCACTTTTAATA
GTAACTGTTTTCGATAAAAA

Downstream 100 bases:

>100_bases
GTGGATAGAATATTTTTTCTGCAAAACGCTTGACATATTTTTAAAACATGATAAAATAATAGTCGTAAGGGCGAATAAAA
TCGCTTTCAAACAAGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MQAFYVKKEEKLSNDYHKINTGNQSNFYENVKDNEIKDFLTKVSNLFFKEFLMKQSKTINLKLAH

Sequences:

>Translated_65_residues
MQAFYVKKEEKLSNDYHKINTGNQSNFYENVKDNEIKDFLTKVSNLFFKEFLMKQSKTINLKLAH
>Mature_65_residues
MQAFYVKKEEKLSNDYHKINTGNQSNFYENVKDNEIKDFLTKVSNLFFKEFLMKQSKTINLKLAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7792; Mature: 7792

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFYVKKEEKLSNDYHKINTGNQSNFYENVKDNEIKDFLTKVSNLFFKEFLMKQSKTIN
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LKLAH
EEECC
>Mature Secondary Structure
MQAFYVKKEEKLSNDYHKINTGNQSNFYENVKDNEIKDFLTKVSNLFFKEFLMKQSKTIN
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
LKLAH
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA