| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is yknX [H]
Identifier: 116515711
GI number: 116515711
Start: 700729
End: 701928
Strand: Direct
Name: yknX [H]
Synonym: SPD_0686
Alternate gene names: 116515711
Gene position: 700729-701928 (Clockwise)
Preceding gene: 116517047
Following gene: 116515985
Centisome position: 34.25
GC content: 42.5
Gene sequence:
>1200_bases ATGAAGAAAAAGAATGGTAAAGCTAAAAAGTGGCAACTGTATGCAGCAATCGGTGCTGCGAGTGTAGTTGTATTGGGTGC TGGGGGGATTTTACTCTTTAGACAACCTTCTCAGACTGCTCTAAAAGATGAGCCTACTCATCTTGTTGTTGCCAAGGAAG GAAGCGTGGCCTCCTCTGTTTTATTGTCAGGGACAGTAACAGCAAAAAATGAACAATATGTTTATTTTGATGCTAGTAAG GGTGATTTAGATGAAATCCTTGTTTCTGTGGGCGATAAGGTCAGCGAAGGGCAGGCTTTAGTCAAGTACAGTAGTTCAGA AGCGCAGGCGGCCTATGATTCAGCTAGTCGAGCAGTAGCTAGGGCAGATCGTCATATCAATGAACTCAATCAAGCACGAA ATGAAGCCGCTTCAGCTCCGGCTCCACAGTTACCAGCGCCAGTAGGAGGAGAAGATGCAACGGTGCAAAGCCCAACTCCA GTGGCTGGAAATTCTGTTGCTTCTATTGACGCTCAATTGGGTGATGCCCGTGATGCGCGTGCAGATGCTGCGGCGCAATT AAGCAAGGCTCAAAGTCAATTGGATGCAACAACTGTTCTCAGTACCCTAGAGGGAACTGTGGTCGAAGTCAATAGCAATG TTTCTAAATCTCCAACAGGGGCGAGTCAAGTTATGGTTCATATTGTCAGCAATGAAAATTTACAAGTCAAGGGAGAATTG TCTGAGTACAATCTAGCCAACCTTTCTGTAGGTCAAGAAGTAAGCTTTACTTCTAAAGTGTATCCTGATAAAAAATGGAC TGGGAAATTAAGCTATATTTCTGACTATCCTAAAAACAATGGTGAAGCAGCTAGTCCAGCAGCCGGGAATAATACAGGTT CTAAATACCCTTATACTATTGATGTGACAGGCGAGGTTGGTGATTTGAAACAGGGTTTTTCTGTCAACATTGAGGTTAAA AGCAAAACTAAGGCTATTCTTGTTCCTGTTAGCAGTCTAGTAATGGATGATAGTAAAAATTATGTCTGGATTGTGGATGA ACAACAAAAGGCTAAAAAAGTTGAGGTTTCATTGGGAAATGCTGACGCAGAAAATCAAGAAATCACTTCTGGTTTAACGA ATGGTGCTAAGGTCATCAGTAATCCAACATCTTCCTTGGAAGAAGGAAAAGAGGTGAAGACTGATGAAGCAACTAATTAG
Upstream 100 bases:
>100_bases GCAAAATTCCGAACGATTGTTTAATCCTGAACTGTATTGTTTGCTGGAGGGAAATTTGGTATAATAGCAAAGTATTGTAA AAAAGAAAAGGAGTTTCATT
Downstream 100 bases:
>100_bases TCTAAAAAATATCTTCAGAAGCTACCGTAATGGTGACCAAGAATTGCAGGTTCTCAAAAATATCAATCTAGAAGTGAATG AGGGTGAATTTGTAGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTALKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVARADRHINELNQARNEAASAPAPQLPAPVGGEDATVQSPTP VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPAAGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN
Sequences:
>Translated_399_residues MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTALKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVARADRHINELNQARNEAASAPAPQLPAPVGGEDATVQSPTP VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPAAGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN >Mature_399_residues MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTALKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVARADRHINELNQARNEAASAPAPQLPAPVGGEDATVQSPTP VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPAAGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41865; Mature: 41865
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTALKDEPTHLVVAKEGSVASSV CCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHE LLSGTVTAKNEQYVYFDASKGDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVA EEECEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RADRHINELNQARNEAASAPAPQLPAPVGGEDATVQSPTPVAGNSVASIDAQLGDARDAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHH ADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECC SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPAAGNNTGSKYPYTI CCCCEEECCCCCCCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEE DVTGEVGDLKQGFSVNIEVKSKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGN EECCCCCCCCCCCEEEEEEECCCEEEEEEHHHHEEECCCCEEEEECCCCCCEEEEEEECC ADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN CCCCCHHHHHHHCCCHHEECCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTALKDEPTHLVVAKEGSVASSV CCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHE LLSGTVTAKNEQYVYFDASKGDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVA EEECEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH RADRHINELNQARNEAASAPAPQLPAPVGGEDATVQSPTPVAGNSVASIDAQLGDARDAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHH ADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECC SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPAAGNNTGSKYPYTI CCCCEEECCCCCCCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEE DVTGEVGDLKQGFSVNIEVKSKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGN EECCCCCCCCCCCEEEEEEECCCEEEEEEHHHHEEECCCCEEEEECCCCCCEEEEEEECC ADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN CCCCCHHHHHHHCCCHHEECCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]