Definition | Streptococcus pneumoniae D39, complete genome. |
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Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116515698
Identifier: 116515698
GI number: 116515698
Start: 1009746
End: 1010924
Strand: Direct
Name: 116515698
Synonym: SPD_1000
Alternate gene names: NA
Gene position: 1009746-1010924 (Clockwise)
Preceding gene: 116516782
Following gene: 116516470
Centisome position: 49.35
GC content: 37.32
Gene sequence:
>1179_bases ATGAATCGCTATGCAGTGCAGTTGATTAGCCGTGGGGCTATCAATAAAATGGGAAATATGCTCTATGATTATGGAAATAG TGTCTGGTTGGCTTCTATGGGGACTATAGGACAGACAGTTTTAGGAATGTATCAGATTTCTGAGCTCGTCACATCTATTC TCGTCAATCCCTTTGGCGGAGTTATTTCAGACCGTTTTTCTCGTCGTAAGATTTTAATGACGGCAGATCTTGTTTGTGGG ATTCTTTGTCTGGCTATTTCTTTCATAAGGAATGATAGCTGGATGATTGGCGCTTTGATTGTTGCTAACATTGTGCAGGC TATTGCTTTTGCCTTTTCTCGCACAGCCAATAAAGCTATCATAACTGAAGTGGTGGAGAAAAATGAGATTGTGATCTATA ATTCTCGCTTAGAGCTGGTTTTGCAGGTTGTAGGTGTTAGCTCTCCTGTTCTTTCCTTCCTTGTTTTACAGTTTGCAAGT CTCCATATGACGCTACTGCTAGACTCGCTGACTTTTTTCATTGCTTTTGTTCTAGTGGCTTTCCTTCCAAAAGAGGAAGC AAAAGTTCAAGAGAAAAAGGCTTTTACTGGGAGAGATATTTTTGTAGATATCAAGGATGGGTTACACTATATCTGGCATC AGCAAGAAATTTTCTTCCTTTTGCTGGTAGCTTCCAGCGTTAATTTCTTTTTTGCAGCTTTTGAATTTCTACTTCCCTTT TCGAATCAGCTTTACGGGTCAGAAGGAGCCTATGCAAGTATTTTAACTATGGGGGCTATTGGTTCCATCATTGGGGCTCT TCTAGCTAGTAAAATTAAAGCTAATATTTATAATCTTTTGATTTTACTGGCTTTGACAGGTGTCGGAGTTTTTATGATGG GATTACCACTTCCAACTTTTCTTTCCTTTTCTGGAAATTTAGTTTGTGAATTGTTTATGACGATTTTTAATATTCACTTT TTTACTCAAGTACAAACCAAGGTTGAGAGCGAATTTCTTGGAAGAGTACTGAGTACAATTTTTACCTTAGCTATTCTATT TATGCCTATTGCAAAAGGATTTATGACAGTCTTGCCAAGTGTACATCTCTCTTCTTTCCTGATAATTGGAAGTGGTGTTA TCATCTTGTCTTGTATATCGTTTATTTATGTTCGAACTCATTTTGAAAAATTGATATAA
Upstream 100 bases:
>100_bases GAAAAATTTGTCAAAAGTTAATTTTCCCAAATAAGGGAAAAAATAAAAAGCTCCTTTCGGTTTTGATACAATAGTTTCAA AATTTGAGAGGAGCTTTAAT
Downstream 100 bases:
>100_bases GGTTGCTTGAGTTTCAAAAATAATTTCAAACTAAGTGTTTTTTCCGCCCTTCTCGTTTGTGAGGAGGGCTTGTTTTATGG TAAAATGGTCTTATGAATAA
Product: transporter major facilitator family protein
Products: NA
Alternate protein names: Transporter SP; Permease; Efflux Protein; Transporter Protein; Non-Ribosomal Peptide Synthetase-Like Protein; ABC Transporter Permease; Facilitator Transporter; ABC Transporter Membrane-Spanning Permease; Amino Acid Adenylation Domain-Containing Protein; Glucose-Dependent Multidrug Resistance Protein; Facilitator Family Transporter
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MNRYAVQLISRGAINKMGNMLYDYGNSVWLASMGTIGQTVLGMYQISELVTSILVNPFGGVISDRFSRRKILMTADLVCG ILCLAISFIRNDSWMIGALIVANIVQAIAFAFSRTANKAIITEVVEKNEIVIYNSRLELVLQVVGVSSPVLSFLVLQFAS LHMTLLLDSLTFFIAFVLVAFLPKEEAKVQEKKAFTGRDIFVDIKDGLHYIWHQQEIFFLLLVASSVNFFFAAFEFLLPF SNQLYGSEGAYASILTMGAIGSIIGALLASKIKANIYNLLILLALTGVGVFMMGLPLPTFLSFSGNLVCELFMTIFNIHF FTQVQTKVESEFLGRVLSTIFTLAILFMPIAKGFMTVLPSVHLSSFLIIGSGVIILSCISFIYVRTHFEKLI
Sequences:
>Translated_392_residues MNRYAVQLISRGAINKMGNMLYDYGNSVWLASMGTIGQTVLGMYQISELVTSILVNPFGGVISDRFSRRKILMTADLVCG ILCLAISFIRNDSWMIGALIVANIVQAIAFAFSRTANKAIITEVVEKNEIVIYNSRLELVLQVVGVSSPVLSFLVLQFAS LHMTLLLDSLTFFIAFVLVAFLPKEEAKVQEKKAFTGRDIFVDIKDGLHYIWHQQEIFFLLLVASSVNFFFAAFEFLLPF SNQLYGSEGAYASILTMGAIGSIIGALLASKIKANIYNLLILLALTGVGVFMMGLPLPTFLSFSGNLVCELFMTIFNIHF FTQVQTKVESEFLGRVLSTIFTLAILFMPIAKGFMTVLPSVHLSSFLIIGSGVIILSCISFIYVRTHFEKLI >Mature_392_residues MNRYAVQLISRGAINKMGNMLYDYGNSVWLASMGTIGQTVLGMYQISELVTSILVNPFGGVISDRFSRRKILMTADLVCG ILCLAISFIRNDSWMIGALIVANIVQAIAFAFSRTANKAIITEVVEKNEIVIYNSRLELVLQVVGVSSPVLSFLVLQFAS LHMTLLLDSLTFFIAFVLVAFLPKEEAKVQEKKAFTGRDIFVDIKDGLHYIWHQQEIFFLLLVASSVNFFFAAFEFLLPF SNQLYGSEGAYASILTMGAIGSIIGALLASKIKANIYNLLILLALTGVGVFMMGLPLPTFLSFSGNLVCELFMTIFNIHF FTQVQTKVESEFLGRVLSTIFTLAILFMPIAKGFMTVLPSVHLSSFLIIGSGVIILSCISFIYVRTHFEKLI
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43402; Mature: 43402
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYAVQLISRGAINKMGNMLYDYGNSVWLASMGTIGQTVLGMYQISELVTSILVNPFGG CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH VISDRFSRRKILMTADLVCGILCLAISFIRNDSWMIGALIVANIVQAIAFAFSRTANKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ITEVVEKNEIVIYNSRLELVLQVVGVSSPVLSFLVLQFASLHMTLLLDSLTFFIAFVLVA HHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKEEAKVQEKKAFTGRDIFVDIKDGLHYIWHQQEIFFLLLVASSVNFFFAAFEFLLPF HCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNQLYGSEGAYASILTMGAIGSIIGALLASKIKANIYNLLILLALTGVGVFMMGLPLPTF CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LSFSGNLVCELFMTIFNIHFFTQVQTKVESEFLGRVLSTIFTLAILFMPIAKGFMTVLPS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH VHLSSFLIIGSGVIILSCISFIYVRTHFEKLI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNRYAVQLISRGAINKMGNMLYDYGNSVWLASMGTIGQTVLGMYQISELVTSILVNPFGG CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH VISDRFSRRKILMTADLVCGILCLAISFIRNDSWMIGALIVANIVQAIAFAFSRTANKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ITEVVEKNEIVIYNSRLELVLQVVGVSSPVLSFLVLQFASLHMTLLLDSLTFFIAFVLVA HHHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKEEAKVQEKKAFTGRDIFVDIKDGLHYIWHQQEIFFLLLVASSVNFFFAAFEFLLPF HCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNQLYGSEGAYASILTMGAIGSIIGALLASKIKANIYNLLILLALTGVGVFMMGLPLPTF CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LSFSGNLVCELFMTIFNIHFFTQVQTKVESEFLGRVLSTIFTLAILFMPIAKGFMTVLPS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH VHLSSFLIIGSGVIILSCISFIYVRTHFEKLI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA