Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

Click here to switch to the map view.

The map label for this gene is 116515659

Identifier: 116515659

GI number: 116515659

Start: 1716963

End: 1717325

Strand: Reverse

Name: 116515659

Synonym: SPD_1720

Alternate gene names: NA

Gene position: 1717325-1716963 (Counterclockwise)

Preceding gene: 116516021

Following gene: 116516557

Centisome position: 83.93

GC content: 41.87

Gene sequence:

>363_bases
ATGAGTCAGAAATTATACAATATGAAATTTGCTGCTGTCTACTTAGCCTTGATTGCAAAAGTTGAGCGAAAGGGTGGAAA
GGCAGAGTCAGTTCACCAAGTGACCAGTTGGTTGACAGGGTATGAAGTGAGTGACGTTCTTGCTTGTCTGGATAGGGATG
TTACTTACGGAGATTTTTTTCGACAAGCACCATATTATGTCCCTGAACGAATTGCAATTACAGGGAAGATTTGCGGTGTC
CGTATTGAGGAAATTGATGATCCTCTGATGCAGGAAATACGTCGCTTGGACAAGCTAGTGGATTGGCTTGCCAAGGGGAA
AACATCTCAACAAGTTCTAGAAAAGTATGAGAAGCATAAATGA

Upstream 100 bases:

>100_bases
ATAGTCAATTTACAGAAGATGAAGCAGAAGAATAAATCAAAAGAAGGCTTGACGACCTTCTTTTTCTTATTTATACTAGT
ACACATAGAAAGAGAGAAGT

Downstream 100 bases:

>100_bases
AAAATTATCAAGAATGGTATCGAAATATCAGATCCAGACTAACTAGTCGTCCAATTCTTTTATTCCTATTACGCAGTTTC
AATCGTTTGATGACAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGV
RIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK

Sequences:

>Translated_120_residues
MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGV
RIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
>Mature_119_residues
SQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGVR
IEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK

Specific function: Unknown

COG id: COG4898

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13844; Mature: 13713

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFF
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
HCCCCCCCCCEEEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFF
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
HCCCCCCCCCEEEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA