Definition | Streptococcus pneumoniae D39, complete genome. |
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Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116515659
Identifier: 116515659
GI number: 116515659
Start: 1716963
End: 1717325
Strand: Reverse
Name: 116515659
Synonym: SPD_1720
Alternate gene names: NA
Gene position: 1717325-1716963 (Counterclockwise)
Preceding gene: 116516021
Following gene: 116516557
Centisome position: 83.93
GC content: 41.87
Gene sequence:
>363_bases ATGAGTCAGAAATTATACAATATGAAATTTGCTGCTGTCTACTTAGCCTTGATTGCAAAAGTTGAGCGAAAGGGTGGAAA GGCAGAGTCAGTTCACCAAGTGACCAGTTGGTTGACAGGGTATGAAGTGAGTGACGTTCTTGCTTGTCTGGATAGGGATG TTACTTACGGAGATTTTTTTCGACAAGCACCATATTATGTCCCTGAACGAATTGCAATTACAGGGAAGATTTGCGGTGTC CGTATTGAGGAAATTGATGATCCTCTGATGCAGGAAATACGTCGCTTGGACAAGCTAGTGGATTGGCTTGCCAAGGGGAA AACATCTCAACAAGTTCTAGAAAAGTATGAGAAGCATAAATGA
Upstream 100 bases:
>100_bases ATAGTCAATTTACAGAAGATGAAGCAGAAGAATAAATCAAAAGAAGGCTTGACGACCTTCTTTTTCTTATTTATACTAGT ACACATAGAAAGAGAGAAGT
Downstream 100 bases:
>100_bases AAAATTATCAAGAATGGTATCGAAATATCAGATCCAGACTAACTAGTCGTCCAATTCTTTTATTCCTATTACGCAGTTTC AATCGTTTGATGACAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGV RIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
Sequences:
>Translated_120_residues MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGV RIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK >Mature_119_residues SQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGVR IEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
Specific function: Unknown
COG id: COG4898
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13844; Mature: 13713
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFF CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH RQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK HCCCCCCCCCEEEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure SQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFF CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH RQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK HCCCCCCCCCEEEEHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA