| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is thiM2 [H]
Identifier: 116515654
GI number: 116515654
Start: 650945
End: 651748
Strand: Direct
Name: thiM2 [H]
Synonym: SPD_0630
Alternate gene names: 116515654
Gene position: 650945-651748 (Clockwise)
Preceding gene: 116516704
Following gene: 116515649
Centisome position: 31.81
GC content: 43.28
Gene sequence:
>804_bases ATGCAGGAATTTACAAATCCCTTTCCTATAGGCTCTAGTTCCCTCATTCACTGCATTACCAATGAGATTTCTTGTGAGAT GCTGGCAAATGGGATTTTGGCTCTGGGATGCAAACCTGTCATGGCAGATGATTCCCGTGAAGTTCTTGATTTTACTAAGC AAAGTCAGGCTCTCTTCATCAATTTGGGGCATTTGTCAGCTGAGAAGGAAAAAGCAATCCGCATGGCAGCTTCGTATGCA AACCAATCTTCTCTCCCGATGGTAGTAGATGCGGTTGGCGTAACGACTTCATCCATTCGTAAGAGCTTAGTTAAAGACCT TTTAGACTATAGACCTACGGTTCTTAAAGGAAACATGTCAGAAATTCGAAGTCTTGTTGGATTAAAGCACCACGGCGTTG GGGTCGATGCGAGTGCTAAAGATCAAGAAACGGAGGATTTGCTTCAAGTCTTGAAAGACTGGTGTCAGACCTATCCTGGT ATGTCTTTCTTAGTCACAGGTCCCAAGGACCTCGTCGTTTCGAAAAATCAGGTCGCTGTACTGGGAAATGGCTGTACTGA ATTAGACTGGATAACAGGGACAGGAGACTTGGTTGGAGCCTTAACAGCTGTTTTTCTCAGCCAAGGAAAGACTGGTTTTG AAGCTTCTTGCTTAGCAGTCTCTTATCTCAATATCGCTGCTGAGAAAATAGTTGTTCAAGGAATGGGATTGGAAGAATTT CGTTACCAAGTACTCAATCAGCTTTCGCTCCTAAGAAGAGATGAAAATTGGCTAGATACCATCAAAGGAGAGGTTTATGA ATAG
Upstream 100 bases:
>100_bases TGATTGGTACAGCGATTTCCTTTATTGCCTTTCGATTTTTAATCAAGCAGGAATTCTTTAAAAAAGTGCAGGGATATTTC TTTAGTGAAAGGATAGACTG
Downstream 100 bases:
>100_bases AGAAGCACTTAGACTATATCTGGTAACCAATCGCTATCAAGATTCCGTGGAAAGCTTTCTTGCAAAAGTTGAGACGGCCT GCCGTTCAGGGGTTACCATA
Product: hydroxyethylthiazole kinase
Products: NA
Alternate protein names: 4-methyl-5-beta-hydroxyethylthiazole kinase 2; TH kinase 2; Thz kinase 2 [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQEFTNPFPIGSSSLIHCITNEISCEMLANGILALGCKPVMADDSREVLDFTKQSQALFINLGHLSAEKEKAIRMAASYA NQSSLPMVVDAVGVTTSSIRKSLVKDLLDYRPTVLKGNMSEIRSLVGLKHHGVGVDASAKDQETEDLLQVLKDWCQTYPG MSFLVTGPKDLVVSKNQVAVLGNGCTELDWITGTGDLVGALTAVFLSQGKTGFEASCLAVSYLNIAAEKIVVQGMGLEEF RYQVLNQLSLLRRDENWLDTIKGEVYE
Sequences:
>Translated_267_residues MQEFTNPFPIGSSSLIHCITNEISCEMLANGILALGCKPVMADDSREVLDFTKQSQALFINLGHLSAEKEKAIRMAASYA NQSSLPMVVDAVGVTTSSIRKSLVKDLLDYRPTVLKGNMSEIRSLVGLKHHGVGVDASAKDQETEDLLQVLKDWCQTYPG MSFLVTGPKDLVVSKNQVAVLGNGCTELDWITGTGDLVGALTAVFLSQGKTGFEASCLAVSYLNIAAEKIVVQGMGLEEF RYQVLNQLSLLRRDENWLDTIKGEVYE >Mature_267_residues MQEFTNPFPIGSSSLIHCITNEISCEMLANGILALGCKPVMADDSREVLDFTKQSQALFINLGHLSAEKEKAIRMAASYA NQSSLPMVVDAVGVTTSSIRKSLVKDLLDYRPTVLKGNMSEIRSLVGLKHHGVGVDASAKDQETEDLLQVLKDWCQTYPG MSFLVTGPKDLVVSKNQVAVLGNGCTELDWITGTGDLVGALTAVFLSQGKTGFEASCLAVSYLNIAAEKIVVQGMGLEEF RYQVLNQLSLLRRDENWLDTIKGEVYE
Specific function: Thiamine biosynthesis. [C]
COG id: COG2145
COG function: function code H; Hydroxyethylthiazole kinase, sugar kinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Thz kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788421, Length=242, Percent_Identity=28.9256198347107, Blast_Score=107, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000417 [H]
Pfam domain/function: PF02110 HK [H]
EC number: =2.7.1.50 [H]
Molecular weight: Translated: 29082; Mature: 29082
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFTNPFPIGSSSLIHCITNEISCEMLANGILALGCKPVMADDSREVLDFTKQSQALFI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEE NLGHLSAEKEKAIRMAASYANQSSLPMVVDAVGVTTSSIRKSLVKDLLDYRPTVLKGNMS EECCCCHHHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHCCCCEEECCHH EIRSLVGLKHHGVGVDASAKDQETEDLLQVLKDWCQTYPGMSFLVTGPKDLVVSKNQVAV HHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCEEE LGNGCTELDWITGTGDLVGALTAVFLSQGKTGFEASCLAVSYLNIAAEKIVVQGMGLEEF EECCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH RYQVLNQLSLLRRDENWLDTIKGEVYE HHHHHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure MQEFTNPFPIGSSSLIHCITNEISCEMLANGILALGCKPVMADDSREVLDFTKQSQALFI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCEEEE NLGHLSAEKEKAIRMAASYANQSSLPMVVDAVGVTTSSIRKSLVKDLLDYRPTVLKGNMS EECCCCHHHHHHHHHHHHHCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHCCCCEEECCHH EIRSLVGLKHHGVGVDASAKDQETEDLLQVLKDWCQTYPGMSFLVTGPKDLVVSKNQVAV HHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHEECCCCEEE LGNGCTELDWITGTGDLVGALTAVFLSQGKTGFEASCLAVSYLNIAAEKIVVQGMGLEEF EECCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH RYQVLNQLSLLRRDENWLDTIKGEVYE HHHHHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA