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The map label for this gene is yhiD [H]

Identifier: 116515634

GI number: 116515634

Start: 1621092

End: 1621802

Strand: Reverse

Name: yhiD [H]

Synonym: SPD_1606

Alternate gene names: 116515634

Gene position: 1621802-1621092 (Counterclockwise)

Preceding gene: 116516480

Following gene: 116516729

Centisome position: 79.26

GC content: 36.57

Gene sequence:

>711_bases
ATGACAGCCACTAGTCTTGGGTTATCAAATATTGAAATAGTTGTCAGGATTGTTTTATCAGTAGTCATTGGTAGTATAAT
TGGTTTAGAGAGAGGGAGCAAATCCCAGCCTGCAGGCATCCGAACTTATAGTATTGTTTGTCTAGCTGCATGTTTGATTA
TGATGACGAATGAATACGTATCTTATAAATTTGGGACAGGAGATCCTACACGATTAGGAGCTCAAGTTATATCAGGTGTG
GGTTTTCTAGGCGCTGGAACGATTCTTATTACAGATAAAAAGAAAATTACAGGTCTGACAACTGCAGCAGGCATTTGGGC
TTCGGCAGGAATTGGATTAGCTATTGGAGTAGGTTTTTATGAGGGAGCTCTTTTAGTAGCCATTTCTGTTTGGGGTGTGA
TATCCATGTTCCAACCACTAAAAAAATATCTGCAAAATCGTTCTAAAATGATTGAATTGTATATAGTAGTTAAATCTACA
GAAGCCTATAATCGTGTATTGGTTTATTGTGCAGAAAATGGTATCAGAATGACCGATTCAAGAACAGCGTTTGGAGATGT
TAATTCTGACAGAATTGAATACTTTGATGTTCCGGACAAAAAAATAGCGTCATTTATTACTCTGGAATTATCAGGTAGAT
TTGAACATCTTCGACTGATGGAAGAAATTGCTAATATTGTAGGTGTTATTTATGTCGAAGAAATTAGCTGA

Upstream 100 bases:

>100_bases
CACAAGCTCTGGTATTTGTTTATACAATTGTTCTGATGATTATTTCTGGAACGGTATTATACTTCACACAAAGACCGGGG
CGTAAAGTAAGGAAATAATC

Downstream 100 bases:

>100_bases
AATTTAGTAAACAAAGGGACAGATGTTTTTGTCCTTTTGTTTTTTAGATGTTTTAATCATCTAATTTTTGAGTAGATTTT
TGCTCAGAGGTTTTTATGAA

Product: MgtC/SapB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTATSLGLSNIEIVVRIVLSVVIGSIIGLERGSKSQPAGIRTYSIVCLAACLIMMTNEYVSYKFGTGDPTRLGAQVISGV
GFLGAGTILITDKKKITGLTTAAGIWASAGIGLAIGVGFYEGALLVAISVWGVISMFQPLKKYLQNRSKMIELYIVVKST
EAYNRVLVYCAENGIRMTDSRTAFGDVNSDRIEYFDVPDKKIASFITLELSGRFEHLRLMEEIANIVGVIYVEEIS

Sequences:

>Translated_236_residues
MTATSLGLSNIEIVVRIVLSVVIGSIIGLERGSKSQPAGIRTYSIVCLAACLIMMTNEYVSYKFGTGDPTRLGAQVISGV
GFLGAGTILITDKKKITGLTTAAGIWASAGIGLAIGVGFYEGALLVAISVWGVISMFQPLKKYLQNRSKMIELYIVVKST
EAYNRVLVYCAENGIRMTDSRTAFGDVNSDRIEYFDVPDKKIASFITLELSGRFEHLRLMEEIANIVGVIYVEEIS
>Mature_235_residues
TATSLGLSNIEIVVRIVLSVVIGSIIGLERGSKSQPAGIRTYSIVCLAACLIMMTNEYVSYKFGTGDPTRLGAQVISGVG
FLGAGTILITDKKKITGLTTAAGIWASAGIGLAIGVGFYEGALLVAISVWGVISMFQPLKKYLQNRSKMIELYIVVKSTE
AYNRVLVYCAENGIRMTDSRTAFGDVNSDRIEYFDVPDKKIASFITLELSGRFEHLRLMEEIANIVGVIYVEEIS

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=154, Percent_Identity=35.7142857142857, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25551; Mature: 25420

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSLGLSNIEIVVRIVLSVVIGSIIGLERGSKSQPAGIRTYSIVCLAACLIMMTNEYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
SYKFGTGDPTRLGAQVISGVGFLGAGTILITDKKKITGLTTAAGIWASAGIGLAIGVGFY
EEEECCCCHHHHHHHHHHCCCHHCCCEEEEECCCHHCCCHHHHHHHHHCCCCCEEECHHH
EGALLVAISVWGVISMFQPLKKYLQNRSKMIELYIVVKSTEAYNRVLVYCAENGIRMTDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCEEECCC
RTAFGDVNSDRIEYFDVPDKKIASFITLELSGRFEHLRLMEEIANIVGVIYVEEIS
CCCCCCCCCCCEEEECCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHEEEEEEECC
>Mature Secondary Structure 
TATSLGLSNIEIVVRIVLSVVIGSIIGLERGSKSQPAGIRTYSIVCLAACLIMMTNEYV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCE
SYKFGTGDPTRLGAQVISGVGFLGAGTILITDKKKITGLTTAAGIWASAGIGLAIGVGFY
EEEECCCCHHHHHHHHHHCCCHHCCCEEEEECCCHHCCCHHHHHHHHHCCCCCEEECHHH
EGALLVAISVWGVISMFQPLKKYLQNRSKMIELYIVVKSTEAYNRVLVYCAENGIRMTDS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCEEECCC
RTAFGDVNSDRIEYFDVPDKKIASFITLELSGRFEHLRLMEEIANIVGVIYVEEIS
CCCCCCCCCCCEEEECCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]