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The map label for this gene is vex3 [H]

Identifier: 116515629

GI number: 116515629

Start: 533169

End: 534548

Strand: Direct

Name: vex3 [H]

Synonym: SPD_0523

Alternate gene names: 116515629

Gene position: 533169-534548 (Clockwise)

Preceding gene: 116516662

Following gene: 116516514

Centisome position: 26.06

GC content: 44.28

Gene sequence:

>1380_bases
ATGTTACACAACGCATTTGCCTATGTTACAAGGAAGTTTTTCAAATCGATTGTCATCTTCCTGATTATTCTCCTCATGGC
GAGCTTGAGTTTGGTCGGCTTGTCAATCAAGGGAGCTACTGCCAAGGCTTCTCAGGAGACCTTTAAAAATATCACCAATA
GCTTCTCCATGCAAATCAATCGTCGCGTCAACCAAGGAACGCCTCGCGGTGCTGGGAATATCAAGGGTGAAGACATCAAA
AAAATCACCGAAAACAAGGCCATTGAGTCTTATGTCAAACGTATCAACGCTATCGGAGATTTGACTGGATATGACCTGAT
TGAAACGCCAGAAACCAAGAAGAATCTCACTGCTGATCGTGCCAAACGTTTTGGAAGTAGCTTGATGATTACAGGTGTCA
ATGACTCCTCTAAAGAAGACAAGTTTGTCTCTGGTTCTTATAAACTAGTCGAAGGAGAGCACTTAACCAACGACGACAAG
GATAAAATCCTCTTGCACAAGGACTTGGCAGCCAAACACGGCTGGAAAGTAGGGGACAAGGTTAAACTGGACTCTAATAT
CTACGATGCAGATAATGAAAAAGGAGCCAAGGAAACAGTTGAAGTGACAATCAAGGGACTCTTTGATGGTCATAATAAGT
CAGCAGTAACCTACTCACAAGAACTTTACGAAAACACAGCTATTACAGACATTCACACTGCTGCAAAACTTTATGGATAC
ACAGAAGACACAGCCATTTATGGGGACGCAACCTTCTTTGTAACAGCAGACAAGAACTTGGATGATGTTATGAAAGAGTT
GAATGGCATCAGTGGTATCAACTGGAAGAGCTACACACTCGTCAAGAGCTCCTCTAACTACCCAGCTCTTGAGCAATCTA
TATCTGGTATGTACAAGATGGCCAACCTCCTCTTCTGGGGTAGCTTGAGCTTCTCAGTTCTCCTCCTTGCCCTCTTGCTC
AGCCTTTGGATCAACGCCCGTCGCAAGGAAGTGGGAATTCTCCTCTCTATCGGCCTCAAGCAGGCAAGTATCTTGGGTCA
ATTCATCACCGAATCTATCTTGATTGCTATCCCTGCTCTAGTTTCTGCTTACTTCCTAGCTAATTACACTGCCCGTGCAA
TTGGAAACACTGTCCTTGCCAATGTGACTTCAGGTGTTGCCAAACAGGCTAGTAAGGCGGCTCAAGCCTCTAACCTTGGT
GGTGGTGCAGAAGTAGATGGCTTTAGCAAGACCTTGTCGAGCCTAGACATTTCTATTCAGACATCAGACTTTATCATCAT
TTTTGTCCTTGCCTTGGTTCTAGTGGTTCTCGTTATGGCGCTTGCTTCAAGCAATCTCCTTAGAAAACAACCAAAAGAGC
TCTTGCTGGATGGTGAATAA

Upstream 100 bases:

>100_bases
TGAATTAAAGGATAAGAAACTGACTGAAACGCGCAATACTAGTAAATAATTTGAGCTTACTTTAATAGAATGATTAAAAC
AAAATCTAGAAAGGGAATCT

Downstream 100 bases:

>100_bases
ATTTGAAAAAATGAGTCTGGAATAAAGATTGCATCTTGTGTTTCTATTCAAGAATAGTGGATAGGAATGGCTATTTAACA
ATTCAAAATAAATCCGAAAG

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQINRRVNQGTPRGAGNIKGEDIK
KITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADRAKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDK
DKILLHKDLAAKHGWKVGDKVKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKMANLLFWGSLSFSVLLLALLL
SLWINARRKEVGILLSIGLKQASILGQFITESILIAIPALVSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLG
GGAEVDGFSKTLSSLDISIQTSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE

Sequences:

>Translated_459_residues
MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQINRRVNQGTPRGAGNIKGEDIK
KITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADRAKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDK
DKILLHKDLAAKHGWKVGDKVKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKMANLLFWGSLSFSVLLLALLL
SLWINARRKEVGILLSIGLKQASILGQFITESILIAIPALVSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLG
GGAEVDGFSKTLSSLDISIQTSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
>Mature_459_residues
MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQINRRVNQGTPRGAGNIKGEDIK
KITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADRAKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDK
DKILLHKDLAAKHGWKVGDKVKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKMANLLFWGSLSFSVLLLALLL
SLWINARRKEVGILLSIGLKQASILGQFITESILIAIPALVSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLG
GGAEVDGFSKTLSSLDISIQTSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 49985; Mature: 49985

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHH
AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
HHHCCCCEEEEECCCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEHHHHHHCCCCCCCE
VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
EEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHHHCC
TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
CCCCEEEECEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEE
TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCC
>Mature Secondary Structure
MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHH
AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
HHHCCCCEEEEECCCCCCCCCEECCCEEEEECCCCCCCCCCCEEEEHHHHHHCCCCCCCE
VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
EEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHHHCC
TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
CCCCEEEECEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEE
TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]