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The map label for this gene is deoD [H]

Identifier: 116515621

GI number: 116515621

Start: 744036

End: 744746

Strand: Direct

Name: deoD [H]

Synonym: SPD_0730

Alternate gene names: 116515621

Gene position: 744036-744746 (Clockwise)

Preceding gene: 116516976

Following gene: 116516378

Centisome position: 36.36

GC content: 42.48

Gene sequence:

>711_bases
ATGTCTATCCATATTGCTGCTCAGCAGGGTGAAATTGCTGATAAAATTCTTCTTCCTGGGGATCCTCTTCGTGCTAAGTT
TATTGCGGAGAATTTCCTTGGTGATGCTGTTTGTTTTAACGAAGTGCGTAACATGTTTGGTTACACTGGTACTTACAAGG
GTCACCGTGTATCTGTCATGGGAACTGGGATGGGAATGCCATCTATTTCGATTTATGCGCGTGAGTTAATCGTAGACTAC
GGTGTGAAGAAATTGATTCGTGTGGGAACTGCAGGTTCTTTGAATGAAGAGGTTCATGTTCGTGAATTAGTTTTGGCGCA
GGCGGCTGCAACCAACTCAAACATCGTTCGTAATGACTGGCCACAGTACGATTTTCCACAAATTGCTAGCTTTGATTTGC
TTGATAAAGCCTACCATATCGCCAAAGAACTTGGTATGACTACTCACGTTGGGAACGTTTTGTCATCTGATGTCTTTTAC
TCAAATTACTTTGAAAAGAATATCGAGCTTGGTAAATGGGGAGTCAAGGCTGTGGAAATGGAAGCAGCAGCTCTTTACTA
TCTTGCTGCCCAATACCATGTTGATGCGCTAGCTATCATGACCATCTCTGATAGCTTGGTCAATCCAGACGAAGACACAA
CTGCAGAAGAACGTCAAAATACCTTCACTGATATGATGAAGGTTGGTTTGGAAACCTTGATTGCAGAATAA

Upstream 100 bases:

>100_bases
CGGAAAACTCGGAAAATAGATAATCTGACTGAAAAATCAGGATTTCTCGTCAGGTTCCTAATTTTCAGTCGTTTTCTTCT
CGCTCTTTGTATCATAAATT

Downstream 100 bases:

>100_bases
TTATAGCCAAAAAGGAAGCCCTTTATGAATTGTAGGACTTCCTTTTCTTATCCAGAAATTGATCTAGCTCTCTCTGATTT
CGAAGGATAGTGACTTTATG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAVCFNEVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDY
GVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFY
SNYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE

Sequences:

>Translated_236_residues
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAVCFNEVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDY
GVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFY
SNYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
>Mature_235_residues
SIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAVCFNEVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYG
VKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYS
NYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=231, Percent_Identity=50.2164502164502, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1790265, Length=196, Percent_Identity=30.1020408163265, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 26126; Mature: 25995

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAVCFNEVRNMFGYTGTYKGHRVSVM
CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDW
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEM
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
HHHHHHHHHHHHHHCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIHIAAQQGEIADKILLPGDPLRAKFIAENFLGDAVCFNEVRNMFGYTGTYKGHRVSVM
EEEEECCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDW
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEM
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
HHHHHHHHHHHHHHCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA