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The map label for this gene is leuD [H]

Identifier: 116515583

GI number: 116515583

Start: 1144557

End: 1144916

Strand: Reverse

Name: leuD [H]

Synonym: SPD_1113

Alternate gene names: 116515583

Gene position: 1144916-1144557 (Counterclockwise)

Preceding gene: 116516851

Following gene: 116516497

Centisome position: 55.96

GC content: 42.78

Gene sequence:

>360_bases
ATGGTAGGGTCTTCGAGGGAACACGCTGCTTGGGCTCTAGCGGACTATGGTTTTAAGGTCGTGATTGCAGGATCTTTCGG
TGACATTCATTACAATAATGAACTCAATAATGGCATGTTGCCAATCGTTCAGCCTAGAGAGGTTAGAGAGAAACTAGCCC
AGCTAAAACCAACCGACCAGGTAACTGTGGACTTGGAACAACAAAAAATCATCTCACCAGTTGAAGAATTCACCTTCGAG
ATAGATAGCAAGTGGAAACATAAACTCCTAAATAGTTTGGATGATATCGGTATTACCTTGCAGTATGAAGAGTTGATTGC
TGCTTATGAAAAACAACGACCAGCCTACTGGCAGGATTAG

Upstream 100 bases:

>100_bases
CACTTTTCACCACAAGACTCGAAAATGGTACTTTAAAACAGTTTGGTTTCTTGGGATGGTGACCACACTAGTAGCCTTAT
ATTTTATTTGGAGGTAATGG

Downstream 100 bases:

>100_bases
AAAAAATAGAAAAGGAAATATAGTAAACTGAAATAAGATGTAAACAAATGAATTGGTGCTTAACATCCATTTCCAGCAAT
TTTTTAGAAACTACAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQVTVDLEQQKIISPVEEFTFE
IDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD

Sequences:

>Translated_119_residues
MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQVTVDLEQQKIISPVEEFTFE
IDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
>Mature_119_residues
MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQVTVDLEQQKIISPVEEFTFE
IDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD

Specific function: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate [H]

COG id: COG0066

COG function: function code E; 3-isopropylmalate dehydratase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leuD family. LeuD type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786258, Length=118, Percent_Identity=50, Blast_Score=115, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6321429, Length=117, Percent_Identity=49.5726495726496, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012305
- InterPro:   IPR015937
- InterPro:   IPR015928
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00694 Aconitase_C [H]

EC number: =4.2.1.33 [H]

Molecular weight: Translated: 13693; Mature: 13693

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
CCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VTVDLEQQKIISPVEEFTFEIDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
EEEECHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
CCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VTVDLEQQKIISPVEEFTFEIDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
EEEECHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]