| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is pyrG [H]
Identifier: 116515581
GI number: 116515581
Start: 444553
End: 446160
Strand: Direct
Name: pyrG [H]
Synonym: SPD_0442
Alternate gene names: 116515581
Gene position: 444553-446160 (Clockwise)
Preceding gene: 116516666
Following gene: 116516927
Centisome position: 21.73
GC content: 44.22
Gene sequence:
>1608_bases ATGTCTACGAAATATATTTTTGTAACTGGTGGTGTGGTATCGTCTATTGGGAAAGGGATTGTGGCAGCGAGTCTAGGCCG TCTCTTGAAAAATCGTGGTCTCAAAGTAACCATTCAAAAGTTTGACCCTTATATCAATATTGATCCGGGAACCATGAGTC CTTACCAGCACGGGGAAGTTTTTGTGACAGATGACGGAGCTGAGACAGATTTGGACTTGGGTCACTATGAACGTTTCATC GATATCAATCTCAACAAATATTCCAACGTGACAACTGGGAAAATTTACAGTGAAGTTCTTCGTAAAGAACGCCGTGGAGA ATACCTTGGGGCAACTGTTCAAGTCATTCCTCATATCACAGATGCTTTGAAAGAAAAAATCAAGCGTGCCGCTCTAACGA CCGACTCTGATGTCATTATCACAGAGGTTGGTGGAACAGTAGGAGATATCGAGTCCTTGCCATTCCTAGAGGCTCTTCGT CAGATGAAGGCAGATGTGGGTGCGGATAATGTCATGTATATCCATACAACCTTGCTTCCTTACCTCAAGGCTGCTGGTGA AATGAAAACCAAACCAACCCAACACTCTGTCAAAGAATTGCGTGGCTTGGGAATCCAACCAAATATGTTGGTTATTCGTA CAGAAGAGCCAGCTGGTCAAGGAATTAAAAATAAACTGGCCCAGTTCTGTGATGTGGCACCAGAAGCCGTTATCGAATCG TTGGATGTTGAACACCTTTACCAAATTCCACTGAACTTGCAGGCACAAGGGATGGACCAAATTGTTTGTGATCATTTGAA ATTAGACGCACCAGCAGCGGATATGACAGAATGGTCAGCCATGGTGGACAAGGTCATGAACCTCAAGAAACAAGTTAAGA TTTCCCTTGTTGGTAAGTATGTGGAGTTGCAAGATGCCTATATCTCAGTGGTCGAAGCCTTGAAACACTCTGGCTATGTC AATGATGTAGAAGTTAAAATCAATTGGGTCAATGCCAATGATGTGACAGCAGAGAATGTAGCAGAACTCTTGTCTGATGC GGACGGGATCATCGTACCAGGTGGTTTTGGTCAACGTGGTACAGAAGGGAAAATCCAAGCCATCCGCTATGCGCGTGAAA ATGATGTTCCAATGTTGGGAGTCTGCTTGGGAATGCAGTTGACATGTATCGAGTTTGCTCGTCACGTTTTAGGTCTTGAA GGTGCCAATTCTGCAGAGCTTGCACCAGAAACAAAATACCCTATCATTGATATCATGCGTGATCAGATTGATATTGAGGA TATGGGTGGAACCCTTCGTTTGGGACTTTATCCGTCTAAGTTGAAACGTGGCTCTAAGGCTGCTGCTGCTTATCACAATC AAGAAGTGGTGCAACGCCGTCACCGTCACCGTTATGAGTTTAATAATGCCTTCCGTGAGCAGTTTGAGGCAGCAGGTTTT GTCTTTTCAGGAGTTTCTCCAGACAATCGTTTGGTAGAAATCGTGGAAATTCCTGAAAATAAATTCTTTGTAGCTTGTCA GTATCACCCTGAACTGTCAAGCCGTCCAAACCGACCAGAAGAACTCTACACTGCCTTTGTTACTGCAGCGGTTGAGAACA GCAATTAG
Upstream 100 bases:
>100_bases ATCTGGTGCAGTCGTCCCAGATTATTCTTATTAGTAGGGTCTTGTTTTCTATATCCCCTCGTAGTTAACAAGACCTTGAG CATTTTAGAAAGAGGAATCT
Downstream 100 bases:
>100_bases CAAAATCAGAACCTTTGAGAAAAATCTCAGAGGTTTTTTGCATACGATGATATTGCAGTATATCTGAGGTAGGAGTCCTC TGTATGTACCTGCTACCGTT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MSTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFI DINLNKYSNVTTGKIYSEVLRKERRGEYLGATVQVIPHITDALKEKIKRAALTTDSDVIITEVGGTVGDIESLPFLEALR QMKADVGADNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIES LDVEHLYQIPLNLQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVMNLKKQVKISLVGKYVELQDAYISVVEALKHSGYV NDVEVKINWVNANDVTAENVAELLSDADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLGLE GANSAELAPETKYPIIDIMRDQIDIEDMGGTLRLGLYPSKLKRGSKAAAAYHNQEVVQRRHRHRYEFNNAFREQFEAAGF VFSGVSPDNRLVEIVEIPENKFFVACQYHPELSSRPNRPEELYTAFVTAAVENSN
Sequences:
>Translated_535_residues MSTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFI DINLNKYSNVTTGKIYSEVLRKERRGEYLGATVQVIPHITDALKEKIKRAALTTDSDVIITEVGGTVGDIESLPFLEALR QMKADVGADNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIES LDVEHLYQIPLNLQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVMNLKKQVKISLVGKYVELQDAYISVVEALKHSGYV NDVEVKINWVNANDVTAENVAELLSDADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLGLE GANSAELAPETKYPIIDIMRDQIDIEDMGGTLRLGLYPSKLKRGSKAAAAYHNQEVVQRRHRHRYEFNNAFREQFEAAGF VFSGVSPDNRLVEIVEIPENKFFVACQYHPELSSRPNRPEELYTAFVTAAVENSN >Mature_534_residues STKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID INLNKYSNVTTGKIYSEVLRKERRGEYLGATVQVIPHITDALKEKIKRAALTTDSDVIITEVGGTVGDIESLPFLEALRQ MKADVGADNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESL DVEHLYQIPLNLQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVMNLKKQVKISLVGKYVELQDAYISVVEALKHSGYVN DVEVKINWVNANDVTAENVAELLSDADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLGLEG ANSAELAPETKYPIIDIMRDQIDIEDMGGTLRLGLYPSKLKRGSKAAAAYHNQEVVQRRHRHRYEFNNAFREQFEAAGFV FSGVSPDNRLVEIVEIPENKFFVACQYHPELSSRPNRPEELYTAFVTAAVENSN
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=548, Percent_Identity=47.0802919708029, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI28559085, Length=554, Percent_Identity=46.028880866426, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI28559083, Length=554, Percent_Identity=46.028880866426, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI221316689, Length=554, Percent_Identity=46.028880866426, Blast_Score=490, Evalue=1e-138, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=52.7675276752767, Blast_Score=577, Evalue=1e-166, Organism=Caenorhabditis elegans, GI25148299, Length=605, Percent_Identity=38.3471074380165, Blast_Score=416, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319432, Length=562, Percent_Identity=44.4839857651246, Blast_Score=473, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322563, Length=562, Percent_Identity=44.8398576512456, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI24664469, Length=552, Percent_Identity=44.7463768115942, Blast_Score=487, Evalue=1e-137, Organism=Drosophila melanogaster, GI21357815, Length=497, Percent_Identity=42.2535211267606, Blast_Score=408, Evalue=1e-114,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59257; Mature: 59126
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEV CCCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERRGEYLGATVQVIPHIT EEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH DALKEKIKRAALTTDSDVIITEVGGTVGDIESLPFLEALRQMKADVGADNVMYIHTTLLP HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH YLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIES HHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHH LDVEHLYQIPLNLQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVMNLKKQVKISLVGKY CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHH VELQDAYISVVEALKHSGYVNDVEVKINWVNANDVTAENVAELLSDADGIIVPGGFGQRG HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC TEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLGLEGANSAELAPETKYPIIDIMR CCCHHHHEEECCCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DQIDIEDMGGTLRLGLYPSKLKRGSKAAAAYHNQEVVQRRHRHRYEFNNAFREQFEAAGF HHCCHHHCCCEEEECCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCE VFSGVSPDNRLVEIVEIPENKFFVACQYHPELSSRPNRPEELYTAFVTAAVENSN EEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHEECCCC >Mature Secondary Structure STKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEV CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCEE FVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERRGEYLGATVQVIPHIT EEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH DALKEKIKRAALTTDSDVIITEVGGTVGDIESLPFLEALRQMKADVGADNVMYIHTTLLP HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH YLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIES HHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHH LDVEHLYQIPLNLQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVMNLKKQVKISLVGKY CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHH VELQDAYISVVEALKHSGYVNDVEVKINWVNANDVTAENVAELLSDADGIIVPGGFGQRG HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCC TEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLGLEGANSAELAPETKYPIIDIMR CCCHHHHEEECCCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH DQIDIEDMGGTLRLGLYPSKLKRGSKAAAAYHNQEVVQRRHRHRYEFNNAFREQFEAAGF HHCCHHHCCCEEEECCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCE VFSGVSPDNRLVEIVEIPENKFFVACQYHPELSSRPNRPEELYTAFVTAAVENSN EEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA