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The map label for this gene is 116515574

Identifier: 116515574

GI number: 116515574

Start: 494761

End: 496095

Strand: Direct

Name: 116515574

Synonym: SPD_0488

Alternate gene names: NA

Gene position: 494761-496095 (Clockwise)

Preceding gene: 116517210

Following gene: 116516960

Centisome position: 24.18

GC content: 45.84

Gene sequence:

>1335_bases
ATGACAGATGAACGGATTCATATCCTACGGGATATTTTGTTAGAATTGCACAATGGCGCCTCTCCTGAGTCGGTTCAAGA
TCGCTTTGATGCGACCTTTACGGGCGTGTCAGCCATCGAGATTTCCCTTATGGAGCACGAGCTGATGAACTCGGATTCGG
GCGTCACTTTTGAAGATGTTATGGAACTCTGTGATGTCCATGCCAATCTTTTTAAAAATGCTATCAAAGGTGTCGAAGTT
TTAGATACCGAACACCCTGGGCACCCAGTTCGTGTCTTTAAGGAAGAAAATTTGGCCCTCCGTGCAGCTTTGATTCGCAT
TCGTAGATTGTTAGATACCTATGAGTTGATGGAAGACGAGGAAATGCTGGCGGAGATGCGCAAGGGCTTGGTGCGTCAGA
TGGGACTTGTGGGGCAATTTGACATCCATTACCAACGTAAAGAAGAACTCTTCTTTCCTATCATGGAGCGCTATGGACAC
GATTCACCTCCCAAAGTTATGTGGGGAGTGGATGATCAGATTAGGGAACTCTTTCAAACAGCTCTAACGACAGCCAAGTC
ACTACCAGAAGTGTCAATTAGCAGTGTAAAGGAAGCTTTTGAAGCTTTTGCGACAGAGTTTGAAAGTATGATTTTCAAGG
AAGAGTCCATCCTCCTCATGATTCTCCTTGAGTCTTTTACTCAGGATGACTGGATTCAGATTGCGGAGGAGAGCGATGCC
TATGGCTATGCCATCATCCGTCCGTCAGAGAAATGGGTGCCAGAACGACAGAGCTTTATTGAGGAAAAGATTGCAGAGGA
GCCTGTACAGCTAGATACGGCAGAAGGTCAAGTTCAACAAGTCATAGATACGCCAGAAGGCCATTTTACCATTACCTTTA
CCCCTAAGGAAAAGGAAGCTGTGCTGGACCGCCATAGTCAACAGGCTTTTGGTAATGGCTATCTTTCAGTCGAGCAGGCC
AATCTCATCCTCAATCATCTCCCTATGGAGATTACCTTTGTCAATAAAGAAGATATTTTCCAGTATTACAATGACAATAC
GCCAGCTGATGAGATGATTTTCAAACGAACGCCGTCCCAAGTCGGGCGCAATGTCGAACTCTGTCATCCGCCTAAGTATT
TGGACAAGGTCAAGGCTATCATGAAGGGACTTCGTGAGGGGACCAAGGACAAGTATGAAATGTGGTTCAAGTCTGAGTCG
CGAGGCAAGTTTGTCCACATCACCTATGCTGCAGTACACGATGAAGACGGAGAATTCCAAGGAGTGTTGGAGTATGTTCA
GGATATCCAGCCCTACCGTGAGATTGATACGGACTATTTCCGTGGATTAGAATAA

Upstream 100 bases:

>100_bases
AAGTATCACTTAAACAGGGTTCTAAGCTAGCAGGAACTCCTATGGACAAGATTGTACGCACACTGGAAGCGAATGGCTAC
GAAGTGATTGGATTAGACTA

Downstream 100 bases:

>100_bases
GGAGAAAAAATGAGTTACGAACAAGAATTTATGAAGGAATTTGAAGCTTGGGTCAATACCCAAATCATGATTAACGATAT
GGCGCACAAGGAAAGTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; Flavoprotein; Oxidoreductase; NADPH-Dependent FMN Reductase; Pas/Pac Sensor Protein; NADPH-Dependent FMN Reductase Domain Protein; PAS Domain S-Box; PAS Domain S-Box Protein

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTDERIHILRDILLELHNGASPESVQDRFDATFTGVSAIEISLMEHELMNSDSGVTFEDVMELCDVHANLFKNAIKGVEV
LDTEHPGHPVRVFKEENLALRAALIRIRRLLDTYELMEDEEMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGH
DSPPKVMWGVDDQIRELFQTALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWIQIAEESDA
YGYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEAVLDRHSQQAFGNGYLSVEQA
NLILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQVGRNVELCHPPKYLDKVKAIMKGLREGTKDKYEMWFKSES
RGKFVHITYAAVHDEDGEFQGVLEYVQDIQPYREIDTDYFRGLE

Sequences:

>Translated_444_residues
MTDERIHILRDILLELHNGASPESVQDRFDATFTGVSAIEISLMEHELMNSDSGVTFEDVMELCDVHANLFKNAIKGVEV
LDTEHPGHPVRVFKEENLALRAALIRIRRLLDTYELMEDEEMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGH
DSPPKVMWGVDDQIRELFQTALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWIQIAEESDA
YGYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEAVLDRHSQQAFGNGYLSVEQA
NLILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQVGRNVELCHPPKYLDKVKAIMKGLREGTKDKYEMWFKSES
RGKFVHITYAAVHDEDGEFQGVLEYVQDIQPYREIDTDYFRGLE
>Mature_443_residues
TDERIHILRDILLELHNGASPESVQDRFDATFTGVSAIEISLMEHELMNSDSGVTFEDVMELCDVHANLFKNAIKGVEVL
DTEHPGHPVRVFKEENLALRAALIRIRRLLDTYELMEDEEMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGHD
SPPKVMWGVDDQIRELFQTALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWIQIAEESDAY
GYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEAVLDRHSQQAFGNGYLSVEQAN
LILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQVGRNVELCHPPKYLDKVKAIMKGLREGTKDKYEMWFKSESR
GKFVHITYAAVHDEDGEFQGVLEYVQDIQPYREIDTDYFRGLE

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51383; Mature: 51252

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDERIHILRDILLELHNGASPESVQDRFDATFTGVSAIEISLMEHELMNSDSGVTFEDV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
MELCDVHANLFKNAIKGVEVLDTEHPGHPVRVFKEENLALRAALIRIRRLLDTYELMEDE
HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHH
EMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGHDSPPKVMWGVDDQIRELFQT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
ALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWIQIAEESDA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCC
YGYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEA
CEEEEECCCHHCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCEEEEECCCHHHH
VLDRHSQQAFGNGYLSVEQANLILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQ
HHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCHHHHHHHCCHHH
VGRNVELCHPPKYLDKVKAIMKGLREGTKDKYEMWFKSESRGKFVHITYAAVHDEDGEFQ
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCHH
GVLEYVQDIQPYREIDTDYFRGLE
HHHHHHHHCCHHHHCCHHHHCCCC
>Mature Secondary Structure 
TDERIHILRDILLELHNGASPESVQDRFDATFTGVSAIEISLMEHELMNSDSGVTFEDV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
MELCDVHANLFKNAIKGVEVLDTEHPGHPVRVFKEENLALRAALIRIRRLLDTYELMEDE
HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHH
EMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGHDSPPKVMWGVDDQIRELFQT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
ALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWIQIAEESDA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCC
YGYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEA
CEEEEECCCHHCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCEEEEECCCHHHH
VLDRHSQQAFGNGYLSVEQANLILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQ
HHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCHHHHHHHCCHHH
VGRNVELCHPPKYLDKVKAIMKGLREGTKDKYEMWFKSESRGKFVHITYAAVHDEDGEFQ
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEEEEECCCCCHH
GVLEYVQDIQPYREIDTDYFRGLE
HHHHHHHHCCHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA