| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515483
Identifier: 116515483
GI number: 116515483
Start: 1723286
End: 1723894
Strand: Reverse
Name: 116515483
Synonym: SPD_1728
Alternate gene names: NA
Gene position: 1723894-1723286 (Counterclockwise)
Preceding gene: 116515874
Following gene: 116516591
Centisome position: 84.25
GC content: 40.39
Gene sequence:
>609_bases ATGTCTCAATCCAGTTACCTGTCGCCCTTGCTCTGGTTAAAAAAAGAAGCCGATAAGGAAAAGATGAGCGCGACCCAGTG CCAGATATTTTTCTTTTACTATCAAATGTTTGAGCTCTTATTTGCTAGAGAAAGCGACATGAAAGACTTATGTCTGGGAA CGAAAGGTTTTTATTTCTCGCAGTTAGAGAAAAATTTGCTTTCTGGAGTTTCCCGATTTCTAAAAAACTTGGAGGGGAAA GTAACTCTCAAGGCTAACCAAGAAGTATCAGCTCGCAAAGCCCTTTTTCTAGCCTTGACAACTAGCCAATCAGATTGGCA GGAGTTAGCTCCTGTTTTTGATTTTTATCAGACTATCGGGAGGCTTGAAAATCCTTCTCTCTTGAGTTCTCAGGACAGAC AACATCTGATGTGGATTTACCAGTCAGCTTTGGAGAAGGATTATATTGTCAAGGTTATTGGCGACAAGCATTTTGTATTG AAGAGACAAGATGCTACTAAATTGACAGCGCGCCAAACTCAAACTTTGGAAATTCTGAGTCAATCAGAAGACTTGGTCAA TCCTGTCTATGTTACATTAGGAGAAAAGGGGGTGCTCTTGCTTGATTAA
Upstream 100 bases:
>100_bases TCTTATCTCAGAGGAGATTAACCAGTGGGAAAGTATCCAGTCAAAAGAAGTGGCAGCTAGTGCAGATGCTCCAGTTAAAA AAGAGTAGGAGGTAGAGGAA
Downstream 100 bases:
>100_bases GAGAGGAGATGTTGTAGCTCTTTATTTGCCTTTTCCGACTATTAGTAGCGATTTGGCTGTGAAGAATCATATGTATATCT GTATTGACAACAGCATGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSQSSYLSPLLWLKKEADKEKMSATQCQIFFFYYQMFELLFARESDMKDLCLGTKGFYFSQLEKNLLSGVSRFLKNLEGK VTLKANQEVSARKALFLALTTSQSDWQELAPVFDFYQTIGRLENPSLLSSQDRQHLMWIYQSALEKDYIVKVIGDKHFVL KRQDATKLTARQTQTLEILSQSEDLVNPVYVTLGEKGVLLLD
Sequences:
>Translated_202_residues MSQSSYLSPLLWLKKEADKEKMSATQCQIFFFYYQMFELLFARESDMKDLCLGTKGFYFSQLEKNLLSGVSRFLKNLEGK VTLKANQEVSARKALFLALTTSQSDWQELAPVFDFYQTIGRLENPSLLSSQDRQHLMWIYQSALEKDYIVKVIGDKHFVL KRQDATKLTARQTQTLEILSQSEDLVNPVYVTLGEKGVLLLD >Mature_201_residues SQSSYLSPLLWLKKEADKEKMSATQCQIFFFYYQMFELLFARESDMKDLCLGTKGFYFSQLEKNLLSGVSRFLKNLEGKV TLKANQEVSARKALFLALTTSQSDWQELAPVFDFYQTIGRLENPSLLSSQDRQHLMWIYQSALEKDYIVKVIGDKHFVLK RQDATKLTARQTQTLEILSQSEDLVNPVYVTLGEKGVLLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23319; Mature: 23188
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSYLSPLLWLKKEADKEKMSATQCQIFFFYYQMFELLFARESDMKDLCLGTKGFYFS CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHH QLEKNLLSGVSRFLKNLEGKVTLKANQEVSARKALFLALTTSQSDWQELAPVFDFYQTIG HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHC RLENPSLLSSQDRQHLMWIYQSALEKDYIVKVIGDKHFVLKRQDATKLTARQTQTLEILS CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH QSEDLVNPVYVTLGEKGVLLLD CCCHHCCCEEEEECCCCEEEEC >Mature Secondary Structure SQSSYLSPLLWLKKEADKEKMSATQCQIFFFYYQMFELLFARESDMKDLCLGTKGFYFS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHH QLEKNLLSGVSRFLKNLEGKVTLKANQEVSARKALFLALTTSQSDWQELAPVFDFYQTIG HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHC RLENPSLLSSQDRQHLMWIYQSALEKDYIVKVIGDKHFVLKRQDATKLTARQTQTLEILS CCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHH QSEDLVNPVYVTLGEKGVLLLD CCCHHCCCEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA