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The map label for this gene is ysxB [H]

Identifier: 116515440

GI number: 116515440

Start: 1001646

End: 1001990

Strand: Direct

Name: ysxB [H]

Synonym: SPD_0990

Alternate gene names: 116515440

Gene position: 1001646-1001990 (Clockwise)

Preceding gene: 116516747

Following gene: 116515463

Centisome position: 48.95

GC content: 42.03

Gene sequence:

>345_bases
ATGATACAGGCAGTCTTTGAGAGAGCCGAAGATGGCGAGCTGAGGAGTGCGGAAATTACTGGACACGCCGAGAGTGGCGA
ATACGGCTTAGATGTCGTGTGTGCATCGGTTTCTACGCTTGCCATTAACTTTATCAATTCTATTGAGAAATTTGCAGGCT
ATGAACCAATCCTAGAATTAAACGAAGATGAAGGTGGCTATCTGATGGTTGAAATACCAAAAGATCTTCCTTCACACCAG
AGAGAAATGACCCAGTTATTCTTTGAATCATTTTTCTTAGGTATGGCAAACTTATCGGAGAACTCTTCTGAGTTCGTCCA
AACCAGAGTTATCACAGAAAACTAA

Upstream 100 bases:

>100_bases
GTACAAACCTAAAAAAGGTAGCCACCGTAAACAAGGTCACCGTCAACCATATACAAAAGTTGTCATCAACGCAATCAACG
CTTAATTTTAAGGAGAACAC

Downstream 100 bases:

>100_bases
CACGGAGGAAAACATTATGTTAAAAATGACTCTTAACAACTTGCAACTTTTCGCCCACAAAAAAGGTGGAGGTTCTACAT
CAAACGGACGTGATTCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILELNEDEGGYLMVEIPKDLPSHQ
REMTQLFFESFFLGMANLSENSSEFVQTRVITEN

Sequences:

>Translated_114_residues
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILELNEDEGGYLMVEIPKDLPSHQ
REMTQLFFESFFLGMANLSENSSEFVQTRVITEN
>Mature_114_residues
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILELNEDEGGYLMVEIPKDLPSHQ
REMTQLFFESFFLGMANLSENSSEFVQTRVITEN

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 12744; Mature: 12744

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILEL
CCHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NEDEGGYLMVEIPKDLPSHQREMTQLFFESFFLGMANLSENSSEFVQTRVITEN
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC
>Mature Secondary Structure
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILEL
CCHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NEDEGGYLMVEIPKDLPSHQREMTQLFFESFFLGMANLSENSSEFVQTRVITEN
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]