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The map label for this gene is bioY [H]

Identifier: 116515429

GI number: 116515429

Start: 698385

End: 698921

Strand: Reverse

Name: bioY [H]

Synonym: SPD_0684

Alternate gene names: 116515429

Gene position: 698921-698385 (Counterclockwise)

Preceding gene: 116516716

Following gene: 116516284

Centisome position: 34.16

GC content: 44.51

Gene sequence:

>537_bases
TTGAAAAAAGCTCACGTTTATGCTATCCCTGCTATTGGGGCTGCTCTCATTGCTGTTTTGGCACAAATCAGTCTTCCAAT
TGGACCTGTTCCCTTCACTCTGCAAAACTTTGCAATCGGCTTGATTGCTACTGTCTTTAGACCGAGAGAGGCTGTACTTT
CTGCTGGACTCTATCTTCTTCTAGGTGCTATCGGTCTTCCTGTCTTTGCAGGAGGTGGAGCTGGTTTTCAGGCTTTAGTT
GGCCCTACTGCAGGCTATCTTTGGTTTTATCTCGTTTACTCTGGACTTACTTCCTCTCTAACCAACAGCAAGAGTGGTGT
TGTTAAGATTTTTCTTGCAAACCTCTTGGGTGATGCCCTTGTCTTTGTCGGCGGGATTCTCAGCTTGCATTTCCTAGCTG
GAATGGCATTTGAAAAAGCTCTTGTTGTGGGGGTTCTTCCCTTTATCATTCCAGACCTTGGCAAACTTCTGGCTATTAGT
TTTATTAGCCGTCCCCTACTTCAACGCCTTAAAAATCAGGCTTACTTTACTAACTAA

Upstream 100 bases:

>100_bases
GGCTGTTACAGTTTTTGTTACCTTGTTTTTAAAAAATGGTTGACATCGACTCCTATATGAGTATAATAGTTAGTATACAT
TAGAAAAGAGGTTAACTATT

Downstream 100 bases:

>100_bases
AAAAGGATACCGAGTTATCATGACTCAATATCCTTTTTTTATTTTGAAAACTTATACTCAATGAAAATCAAAGAGCAAAC
TAGGAAGCTAGCCGCAGGCT

Product: biotin synthase (BioY family protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKKAHVYAIPAIGAALIAVLAQISLPIGPVPFTLQNFAIGLIATVFRPREAVLSAGLYLLLGAIGLPVFAGGGAGFQALV
GPTAGYLWFYLVYSGLTSSLTNSKSGVVKIFLANLLGDALVFVGGILSLHFLAGMAFEKALVVGVLPFIIPDLGKLLAIS
FISRPLLQRLKNQAYFTN

Sequences:

>Translated_178_residues
MKKAHVYAIPAIGAALIAVLAQISLPIGPVPFTLQNFAIGLIATVFRPREAVLSAGLYLLLGAIGLPVFAGGGAGFQALV
GPTAGYLWFYLVYSGLTSSLTNSKSGVVKIFLANLLGDALVFVGGILSLHFLAGMAFEKALVVGVLPFIIPDLGKLLAIS
FISRPLLQRLKNQAYFTN
>Mature_178_residues
MKKAHVYAIPAIGAALIAVLAQISLPIGPVPFTLQNFAIGLIATVFRPREAVLSAGLYLLLGAIGLPVFAGGGAGFQALV
GPTAGYLWFYLVYSGLTSSLTNSKSGVVKIFLANLLGDALVFVGGILSLHFLAGMAFEKALVVGVLPFIIPDLGKLLAIS
FISRPLLQRLKNQAYFTN

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18659; Mature: 18659

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAHVYAIPAIGAALIAVLAQISLPIGPVPFTLQNFAIGLIATVFRPREAVLSAGLYLL
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGAIGLPVFAGGGAGFQALVGPTAGYLWFYLVYSGLTSSLTNSKSGVVKIFLANLLGDAL
HHHHHHHEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VFVGGILSLHFLAGMAFEKALVVGVLPFIIPDLGKLLAISFISRPLLQRLKNQAYFTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKAHVYAIPAIGAALIAVLAQISLPIGPVPFTLQNFAIGLIATVFRPREAVLSAGLYLL
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGAIGLPVFAGGGAGFQALVGPTAGYLWFYLVYSGLTSSLTNSKSGVVKIFLANLLGDAL
HHHHHHHEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VFVGGILSLHFLAGMAFEKALVVGVLPFIIPDLGKLLAISFISRPLLQRLKNQAYFTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]