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The map label for this gene is 116515427

Identifier: 116515427

GI number: 116515427

Start: 1624621

End: 1625688

Strand: Reverse

Name: 116515427

Synonym: SPD_1609

Alternate gene names: NA

Gene position: 1625688-1624621 (Counterclockwise)

Preceding gene: 116516088

Following gene: 116516345

Centisome position: 79.45

GC content: 34.36

Gene sequence:

>1068_bases
ATGAAAAAAATGAAAGTTTGGTCTACTGTACTTGCAACGGGAGTTGCTCTTACTACACTTGCTGCTTGCTCTGGAGGTTC
AAATTCTACGACTGCTTCTTCATCTGAAGAAAAAGCTGATAAAAGTCAAGAATTAGTAATCTATTCGAACTCAGTCTCAA
ATGGTCGTGGTGATTGGTTAACTGCTAAAGCAAAAGAAGCTGGTTTTAATATAAAAATGGTTGATATTGCTGGCGCTCAA
TTAGCAGACCGTGTTATTGCTGAGAAGAATAATGCAGTTGCAGATATGGTATTTGGAATTGGTGCTGTTGACTCAAATAA
AATTAGAGATCAAAAATTACTAGTACAGTACAAGCCTAAATGGTTAGATAAAATTGATCAATCTTTATCAGATAAAGATA
ATTATTATAATCCTGTGATTGTTCAACCATTAGTTTTAATTGGGGCGCCTGATGTAAAAGAAATGCCTAAAGATTGGACT
GAATTAGGTAGTAAGTATAAAGGTAAATATTCAATTTATGGTCTTCAAGGTGGTACAGGACGGGCAATTCTAGCAAGTAT
CTTAGTTCGTTACCTTGATGAAAAAGGAGATTTAGGCGTATCAGAAAAAGGATGGGAAGTTGCAAAAGAATACTTTGCAA
ATGCCTATACTCTTCAAAAAGGTGAAAGCTCAGTTGTTAAAGCGTTAGATAAAGAAAGCCCAATTCAATACGGTATGATC
TGGGGTTCTGGAGCGTTAATCGGACAAAAAGAACAAAATGTTGAATTCAAAGTTATGACTCCTGAGATTGGTGTACCATT
TGTAACTGAACAAACTATGGTTTTAAGCACTAGTAAAAAACAAGCGTTAGCTAAAGAATTTATTGATTGGTTTGGTCAAT
CAGAAATTCAAGTAGAATATAGTAAAAAATTTGGATCTATTCCTGCAAATAAAGATGCCCTAAAAGAGTTACCTGAAGAT
ACGAAAAAATTTGTTGATCAAGTGAAACCACAAAATATTGACTGGGAAGCTGTTGGAAAGCATTTGGATGAATGGGTAGA
AAAAGCTGAATTAGAATACGTAAAATAA

Upstream 100 bases:

>100_bases
TACTGTAAACCGTATTGACTATACTGTATTTGAAGATATGAGACAATTTGTTCCATATCACGAAAAATTTAAATAAAATA
ATAAAAAAGGAGAACTTATC

Downstream 100 bases:

>100_bases
GAAATAAGAGTTATTTTTTATGTCCAAGTCTCTCTATTATTTCTAAATTTAAGGAAGAAATAAAGAGAGGCTTTTGGTTT
AGTAATAGAGGGAGTTAGTG

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIYSNSVSNGRGDWLTAKAKEAGFNIKMVDIAGAQ
LADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDVKEMPKDWT
ELGSKYKGKYSIYGLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDKESPIQYGMI
WGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEYSKKFGSIPANKDALKELPED
TKKFVDQVKPQNIDWEAVGKHLDEWVEKAELEYVK

Sequences:

>Translated_355_residues
MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIYSNSVSNGRGDWLTAKAKEAGFNIKMVDIAGAQ
LADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDVKEMPKDWT
ELGSKYKGKYSIYGLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDKESPIQYGMI
WGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEYSKKFGSIPANKDALKELPED
TKKFVDQVKPQNIDWEAVGKHLDEWVEKAELEYVK
>Mature_355_residues
MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIYSNSVSNGRGDWLTAKAKEAGFNIKMVDIAGAQ
LADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDVKEMPKDWT
ELGSKYKGKYSIYGLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDKESPIQYGMI
WGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEYSKKFGSIPANKDALKELPED
TKKFVDQVKPQNIDWEAVGKHLDEWVEKAELEYVK

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 39203; Mature: 39203

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIYSNSVSNGRGDWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCEE
TAKAKEAGFNIKMVDIAGAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPK
EEEHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHEEECHH
WLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDVKEMPKDWTELGSKYKGKYSIYGLQGGTG
HHHHHHHHHCCCCCCCCCHHHCCCCEECCCCHHHCCHHHHHHHHHCCCCEEEEEECCCCC
RAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDKESPIQYGMI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCEEEEE
WGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEY
ECCCCEECCCCCCCEEEEECCCCCCCEECCCEEEEECHHHHHHHHHHHHHHCCCEEEEEE
SKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEKAELEYVK
HHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIYSNSVSNGRGDWL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCEE
TAKAKEAGFNIKMVDIAGAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPK
EEEHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHEEECHH
WLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDVKEMPKDWTELGSKYKGKYSIYGLQGGTG
HHHHHHHHHCCCCCCCCCHHHCCCCEECCCCHHHCCHHHHHHHHHCCCCEEEEEECCCCC
RAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDKESPIQYGMI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCEEEEE
WGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEY
ECCCCEECCCCCCCEEEEECCCCCCCEECCCEEEEECHHHHHHHHHHHHHHCCCEEEEEE
SKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEKAELEYVK
HHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]