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The map label for this gene is dxs [C]

Identifier: 116515375

GI number: 116515375

Start: 1925468

End: 1926400

Strand: Reverse

Name: dxs [C]

Synonym: SPD_1957

Alternate gene names: 116515375

Gene position: 1926400-1925468 (Counterclockwise)

Preceding gene: 116515337

Following gene: 116516565

Centisome position: 94.15

GC content: 35.58

Gene sequence:

>933_bases
ATGATGAGAAGTACGAAAGAATTACGGCATGTATATAGAGACTTCCTTTTAGAGGCTAATCAAAGTTCTTCTGATATAGT
AGTCTTAGAAGCCGATTTGTCAAGTTCGATGGCTACTCATAATCTTGAAAAGGACTTTGGAGACCGTTATGTGAATGTTG
GGATTATGGAAGCAGAAATGGTCGGCCTTGCAGCAGGCTTGTCTATTCAGGGGTTTAGACCTTATCTTCATACATTTGGT
CCTTTTTCTTCACGAAGGGTATTTGATCAATTATTTATTTCTCTTGGATACGCACAATTGGATGCCACTGTGATTGGATC
AGATGCAGGAGTAACTGCAGAAATGAATGGTGGGACACATATGCCATTTGAAGAAATTGGCTTGTTACGTTTAATTCCTA
AATCAATCATTTTCGAAGCAACTGATGATATCCAATTTCGTGAAATATTGAATCAGACATTAGACTTAAAAGGACTAAAA
TATATTCGAACAATTAGAAAAGCTCCAGAGGCTGTATATCAAGGTGGAGAAGATTTTTCTAAAGGCTACATTGAGTTAAG
ACATGGTGAAGATCTTGTAATCGTTGCTTCTGGCATAATGGTTGCTCCAAGTATTCGAGTTGCAGATGAACTGTCTAAAT
TAGGTTATTCAGTAGGTGTGATAGATTTATTTAGAATCAAACCGATACCAGAACAGATAAAAACAATGTTAAGTGGAAAA
ACTATATTTACTGTAGAAAACCACAATCAGATAGGTGGAATTGGCAGTGCTTTATGTGAATTATTCTCTGATGATGGAAT
AACAAAAATTCATCGGATGGGTGTTCAAGAAAGATTTGGTCAAGTAGGGAAAATGGATTATCTTCTTAATGAGTATGGTT
TGAGTGAATCGAATATAAAAGAGAAGGTTCTAGAAATTTATAATGCAAGATAG

Upstream 100 bases:

>100_bases
AAGAAATGAAATCCAATCATCATCTTCGCCCTACTGTAGAGGAGAAACAAATGTTAACTTCAGTTGTAGAAAGATTAAGT
CAGGAATTGGAGGAAACAGA

Downstream 100 bases:

>100_bases
ATGTTAAATACACTTATTTGAAAGAATTTCTGTAAAAATTACAGTACGTTATTTAAAGAAAGCGGATTAAAAAGCATATT
CTGGTCATCAGAAAGTGCAC

Product: transketolase, C-terminal subunit

Products: NA

Alternate protein names: TK [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MMRSTKELRHVYRDFLLEANQSSSDIVVLEADLSSSMATHNLEKDFGDRYVNVGIMEAEMVGLAAGLSIQGFRPYLHTFG
PFSSRRVFDQLFISLGYAQLDATVIGSDAGVTAEMNGGTHMPFEEIGLLRLIPKSIIFEATDDIQFREILNQTLDLKGLK
YIRTIRKAPEAVYQGGEDFSKGYIELRHGEDLVIVASGIMVAPSIRVADELSKLGYSVGVIDLFRIKPIPEQIKTMLSGK
TIFTVENHNQIGGIGSALCELFSDDGITKIHRMGVQERFGQVGKMDYLLNEYGLSESNIKEKVLEIYNAR

Sequences:

>Translated_310_residues
MMRSTKELRHVYRDFLLEANQSSSDIVVLEADLSSSMATHNLEKDFGDRYVNVGIMEAEMVGLAAGLSIQGFRPYLHTFG
PFSSRRVFDQLFISLGYAQLDATVIGSDAGVTAEMNGGTHMPFEEIGLLRLIPKSIIFEATDDIQFREILNQTLDLKGLK
YIRTIRKAPEAVYQGGEDFSKGYIELRHGEDLVIVASGIMVAPSIRVADELSKLGYSVGVIDLFRIKPIPEQIKTMLSGK
TIFTVENHNQIGGIGSALCELFSDDGITKIHRMGVQERFGQVGKMDYLLNEYGLSESNIKEKVLEIYNAR
>Mature_310_residues
MMRSTKELRHVYRDFLLEANQSSSDIVVLEADLSSSMATHNLEKDFGDRYVNVGIMEAEMVGLAAGLSIQGFRPYLHTFG
PFSSRRVFDQLFISLGYAQLDATVIGSDAGVTAEMNGGTHMPFEEIGLLRLIPKSIIFEATDDIQFREILNQTLDLKGLK
YIRTIRKAPEAVYQGGEDFSKGYIELRHGEDLVIVASGIMVAPSIRVADELSKLGYSVGVIDLFRIKPIPEQIKTMLSGK
TIFTVENHNQIGGIGSALCELFSDDGITKIHRMGVQERFGQVGKMDYLLNEYGLSESNIKEKVLEIYNAR

Specific function: Catalyzes The Acyloin Condensation Reaction Between C Atoms 2 And 3 Of Pyruvate And Glyceraldehyde 3-Phosphate To Yield 1-Deoxy-D-Xylulose-5-Phosphate (Dxp). [C]

COG id: COG3958

COG function: function code G; Transketolase, C-terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transketolase family [H]

Homologues:

Organism=Homo sapiens, GI225637461, Length=287, Percent_Identity=33.1010452961672, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI225637459, Length=287, Percent_Identity=33.1010452961672, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI225637463, Length=287, Percent_Identity=33.1010452961672, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI133778974, Length=292, Percent_Identity=29.1095890410959, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI205277463, Length=303, Percent_Identity=27.7227722772277, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI4507521, Length=303, Percent_Identity=27.7227722772277, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI1786622, Length=300, Percent_Identity=23.6666666666667, Blast_Score=85, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17539652, Length=298, Percent_Identity=28.1879194630872, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24645119, Length=305, Percent_Identity=25.9016393442623, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45551847, Length=305, Percent_Identity=25.9016393442623, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI45550715, Length=305, Percent_Identity=25.9016393442623, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666278, Length=305, Percent_Identity=22.9508196721311, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005475
- InterPro:   IPR020826
- InterPro:   IPR005476 [H]

Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C [H]

EC number: =2.2.1.1 [H]

Molecular weight: Translated: 34513; Mature: 34513

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSTKELRHVYRDFLLEANQSSSDIVVLEADLSSSMATHNLEKDFGDRYVNVGIMEAEM
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHH
VGLAAGLSIQGFRPYLHTFGPFSSRRVFDQLFISLGYAQLDATVIGSDAGVTAEMNGGTH
HHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEECCCCCC
MPFEEIGLLRLIPKSIIFEATDDIQFREILNQTLDLKGLKYIRTIRKAPEAVYQGGEDFS
CCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCC
KGYIELRHGEDLVIVASGIMVAPSIRVADELSKLGYSVGVIDLFRIKPIPEQIKTMLSGK
CCEEEEECCCCEEEEECCEEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCC
TIFTVENHNQIGGIGSALCELFSDDGITKIHRMGVQERFGQVGKMDYLLNEYGLSESNIK
EEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCHHHHHCCCCHHHHHHHHHCCCCCHHH
EKVLEIYNAR
HHHHHHHCCC
>Mature Secondary Structure
MMRSTKELRHVYRDFLLEANQSSSDIVVLEADLSSSMATHNLEKDFGDRYVNVGIMEAEM
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHH
VGLAAGLSIQGFRPYLHTFGPFSSRRVFDQLFISLGYAQLDATVIGSDAGVTAEMNGGTH
HHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEECCCCCC
MPFEEIGLLRLIPKSIIFEATDDIQFREILNQTLDLKGLKYIRTIRKAPEAVYQGGEDFS
CCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCC
KGYIELRHGEDLVIVASGIMVAPSIRVADELSKLGYSVGVIDLFRIKPIPEQIKTMLSGK
CCEEEEECCCCEEEEECCEEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCC
TIFTVENHNQIGGIGSALCELFSDDGITKIHRMGVQERFGQVGKMDYLLNEYGLSESNIK
EEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCHHHHHCCCCHHHHHHHHHCCCCCHHH
EKVLEIYNAR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]