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The map label for this gene is ydeY [C]

Identifier: 116515329

GI number: 116515329

Start: 969338

End: 970204

Strand: Direct

Name: ydeY [C]

Synonym: SPD_0955

Alternate gene names: 116515329

Gene position: 969338-970204 (Clockwise)

Preceding gene: 116517122

Following gene: 116516417

Centisome position: 47.37

GC content: 42.68

Gene sequence:

>867_bases
ATGATTGTTTCCATTATTTCTCAAGGATTTGTCTGGGCTATTCTAGGTCTGGGAATCTTTATGACATTTAGGATTTTAAA
CTTTCCAGATATGACGACAGAAGGTTCCTTCCCTCTTGGGGGAGCTGTTGCTGTCACTTTGATAACCAAAGGCGTGAACC
CATTTTTAGCGACACTTGTTGCTGTAGGAGCAGGTTGTTTGGCTGGAATGGCAGCAGGCCTTCTTTATACAAAAGGGAAG
ATCCCAACCTTGCTCTCAGGGATTTTGGTGATGACTTCTTGTCACTCAATCATGCTCTTGATTATGGGACGTGCGAATTT
AGGCCTGCTTGGAACCAAGCAAATTCAGGATGTTTTGCCTTTTGATTCGGATTTGAATCAACTCTTGACAGGTCTCATCT
TTGTGAGTATTGTTATTGCTCTCATGCTCTTTTTCTTGGACACTAAACTCGGACAAGCCTATATTGCTACAGGGGATAAT
CCTGATATGGCTAGAAGTTTCGGGATTCATACTGGACACATGGAGCTCATGGGCTTGGTCTTATCAAATGGTGTGATTGC
CCTTGCAGGTGCCCTCATTGCTCAGCAAGAAGGTTATGCCGATGTGTCTCGAGGGATCGGGGTTATCGTTGTGGGGCTTG
CAAGTTTGATTATTGGAGAAGTTATTTTCAAGAGTTTGAGCTTGGCAGAGCGTTTGGTTACTATCGTTGTAGGTTCTATC
GCTTATCAATTTTTAGTGTGGGCAGTTATCGCACTTGGCTTTAATACAAGTTACCTTCGTTTATACAGTGCCTTGATTTT
AGCAGTCTGCCTCATGATTCCAACATTTAAGCAAACAATCTTGAAAGGAGCCAAGTTAAGCAAATGA

Upstream 100 bases:

>100_bases
TTCTCAAAGAAGCAGGACAAGTCATCGAATAAATAAGGTAGGGAGGAGGAGACTCTTCCCATTTTTTAAAAAGATGAATA
TAGAAAGGATTAAATAAAAT

Downstream 100 bases:

>100_bases
CAGCAATTGTAGAATTAAAAAATGCAACCAAAATCGTTAAAAATGGCTTTGATGAAGAAAAGATTATTTTAAATGATGTT
TCCTTAGAAATTTTTGAACA

Product: amino acid or sugar ABC transport systems, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIVSIISQGFVWAILGLGIFMTFRILNFPDMTTEGSFPLGGAVAVTLITKGVNPFLATLVAVGAGCLAGMAAGLLYTKGK
IPTLLSGILVMTSCHSIMLLIMGRANLGLLGTKQIQDVLPFDSDLNQLLTGLIFVSIVIALMLFFLDTKLGQAYIATGDN
PDMARSFGIHTGHMELMGLVLSNGVIALAGALIAQQEGYADVSRGIGVIVVGLASLIIGEVIFKSLSLAERLVTIVVGSI
AYQFLVWAVIALGFNTSYLRLYSALILAVCLMIPTFKQTILKGAKLSK

Sequences:

>Translated_288_residues
MIVSIISQGFVWAILGLGIFMTFRILNFPDMTTEGSFPLGGAVAVTLITKGVNPFLATLVAVGAGCLAGMAAGLLYTKGK
IPTLLSGILVMTSCHSIMLLIMGRANLGLLGTKQIQDVLPFDSDLNQLLTGLIFVSIVIALMLFFLDTKLGQAYIATGDN
PDMARSFGIHTGHMELMGLVLSNGVIALAGALIAQQEGYADVSRGIGVIVVGLASLIIGEVIFKSLSLAERLVTIVVGSI
AYQFLVWAVIALGFNTSYLRLYSALILAVCLMIPTFKQTILKGAKLSK
>Mature_288_residues
MIVSIISQGFVWAILGLGIFMTFRILNFPDMTTEGSFPLGGAVAVTLITKGVNPFLATLVAVGAGCLAGMAAGLLYTKGK
IPTLLSGILVMTSCHSIMLLIMGRANLGLLGTKQIQDVLPFDSDLNQLLTGLIFVSIVIALMLFFLDTKLGQAYIATGDN
PDMARSFGIHTGHMELMGLVLSNGVIALAGALIAQQEGYADVSRGIGVIVVGLASLIIGEVIFKSLSLAERLVTIVVGSI
AYQFLVWAVIALGFNTSYLRLYSALILAVCLMIPTFKQTILKGAKLSK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ego/Ydeyz. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30401; Mature: 30401

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSIISQGFVWAILGLGIFMTFRILNFPDMTTEGSFPLGGAVAVTLITKGVNPFLATLV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
AVGAGCLAGMAAGLLYTKGKIPTLLSGILVMTSCHSIMLLIMGRANLGLLGTKQIQDVLP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
FDSDLNQLLTGLIFVSIVIALMLFFLDTKLGQAYIATGDNPDMARSFGIHTGHMELMGLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHH
LSNGVIALAGALIAQQEGYADVSRGIGVIVVGLASLIIGEVIFKSLSLAERLVTIVVGSI
HHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQFLVWAVIALGFNTSYLRLYSALILAVCLMIPTFKQTILKGAKLSK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIVSIISQGFVWAILGLGIFMTFRILNFPDMTTEGSFPLGGAVAVTLITKGVNPFLATLV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
AVGAGCLAGMAAGLLYTKGKIPTLLSGILVMTSCHSIMLLIMGRANLGLLGTKQIQDVLP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
FDSDLNQLLTGLIFVSIVIALMLFFLDTKLGQAYIATGDNPDMARSFGIHTGHMELMGLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCHHHHHHHH
LSNGVIALAGALIAQQEGYADVSRGIGVIVVGLASLIIGEVIFKSLSLAERLVTIVVGSI
HHCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQFLVWAVIALGFNTSYLRLYSALILAVCLMIPTFKQTILKGAKLSK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]