| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515320
Identifier: 116515320
GI number: 116515320
Start: 1506873
End: 1507337
Strand: Reverse
Name: 116515320
Synonym: SPD_1490
Alternate gene names: NA
Gene position: 1507337-1506873 (Counterclockwise)
Preceding gene: 116515978
Following gene: 116516552
Centisome position: 73.67
GC content: 40.65
Gene sequence:
>465_bases ATGGCACAAAAAGGAGTAAGCCTTATCAAGGCAGCATTTGATACAGACAACTTTCTCATGCGTTTTAGTGAGAAAGTCTT GGACATCGTGACAGCCAATCTTCTTTTTGTCGTCTCTTGTTTGCCCATCGTGACGATTGGAGTGGCTAAAATCAGCCTCT ACGAGACCATGTTTGAGATTAAGAAGAGCAGACGGGTGCCTGTTTTTAAAATCTATCTAAGATCTTTCAAGCAAAATCTG AAACTAGGTCTTCAGCTGGGTTTAATGGAGTTAGGAATTGTGTTTCTCACCCTTTCAGATCTCTATCTTTTCTGGGGTCA AACAGCTCTGCCCTTCCAATTGCTGAAAGCCATTTGTTTAGGTATTCTGATTTTTCTTACTATCGTGATGCTGGCTAGTT ACCCTATAACGGTTTGGACTTCTTGCTTTTTTACAAGTGGGAGTGATGGAAAAGCTATTTGCTAA
Upstream 100 bases:
>100_bases AGAAAAAAGAAAAAATAGATTTGTTCATGGTAGGGACTTATGAAAGCTTTACTGACAAAAAAGAAAACAGTTTACAAAGA AAAATGATGGAGGAGCAAAC
Downstream 100 bases:
>100_bases GTATGAGTAAGGGGTGCAATTATTTCTGAAACTACTTTCAAAGGCTCCAAACGCTATTCTATAAGCGAGAAACTAAAATC TAAGTGTCTATAAGATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAQKGVSLIKAAFDTDNFLMRFSEKVLDIVTANLLFVVSCLPIVTIGVAKISLYETMFEIKKSRRVPVFKIYLRSFKQNL KLGLQLGLMELGIVFLTLSDLYLFWGQTALPFQLLKAICLGILIFLTIVMLASYPITVWTSCFFTSGSDGKAIC
Sequences:
>Translated_154_residues MAQKGVSLIKAAFDTDNFLMRFSEKVLDIVTANLLFVVSCLPIVTIGVAKISLYETMFEIKKSRRVPVFKIYLRSFKQNL KLGLQLGLMELGIVFLTLSDLYLFWGQTALPFQLLKAICLGILIFLTIVMLASYPITVWTSCFFTSGSDGKAIC >Mature_153_residues AQKGVSLIKAAFDTDNFLMRFSEKVLDIVTANLLFVVSCLPIVTIGVAKISLYETMFEIKKSRRVPVFKIYLRSFKQNLK LGLQLGLMELGIVFLTLSDLYLFWGQTALPFQLLKAICLGILIFLTIVMLASYPITVWTSCFFTSGSDGKAIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17248; Mature: 17117
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKGVSLIKAAFDTDNFLMRFSEKVLDIVTANLLFVVSCLPIVTIGVAKISLYETMFEI CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSRRVPVFKIYLRSFKQNLKLGLQLGLMELGIVFLTLSDLYLFWGQTALPFQLLKAICL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GILIFLTIVMLASYPITVWTSCFFTSGSDGKAIC HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AQKGVSLIKAAFDTDNFLMRFSEKVLDIVTANLLFVVSCLPIVTIGVAKISLYETMFEI CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKSRRVPVFKIYLRSFKQNLKLGLQLGLMELGIVFLTLSDLYLFWGQTALPFQLLKAICL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GILIFLTIVMLASYPITVWTSCFFTSGSDGKAIC HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA