Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is fba [H]
Identifier: 116515205
GI number: 116515205
Start: 314190
End: 315266
Strand: Direct
Name: fba [H]
Synonym: BCc_279
Alternate gene names: 116515205
Gene position: 314190-315266 (Clockwise)
Preceding gene: 116515204
Following gene: 116515206
Centisome position: 75.46
GC content: 21.36
Gene sequence:
>1077_bases ATGTGTAAAATTTTAGATATAATAAAACCAGGTGTATTAAATTCTGAAGAAATGAAAATAGTTTTTTTATTAGCTAAAAA AAAAAAATTTGCTATACCAGCAATTAATTGTATTAACACTGATTCAATAAATATTGTATTAGAAACAGCAGCAAAAATGA GATCTCCAGTAATTATTCAATTTTCATATAGTGGTTCTCAATTTTTTAGTGGTTTAGGGTTAAATCTTGAAGAAAAAAAA AAATCAGTTATTGGTGCTATATCTGGAGCTAAATATGTACATATGATTTCAAAGTATTATAAAATTCCTGTTATATTACA TACAGATCATTGTGATTTTAATCATCTTTATTGGATTAATGATTTATTATCTTATGGTAAAAAATTTTTTAAAAAAAAAA AACGTCCGTTATTTTCATCACATATGATTGATTTATCTAAAGAAACAATAAAAAAAAATATTATTTTATCTTCTAAATAT TTAAAAAAAATAACAGAATTAAACATGATGTTAGAAATAGAATTAGGTTGTACCGGTGGAGAAGAAGATGGTATTGATAA CACAAATATAAATAAAAAACTTCTATATACAGATACTAAAGATATTTATTATGCATTTAAAAAATTAATTAATATTAGTA ATAATTTTATTATTGCAGCAGCATTTGGAAATATACACGGAGTATATCAACCAGGTAAAATTTCTTTAAAACTTTCTATA CTAAAAAAAGCTCAAAAATATATTGAGAATATAACAAAATTACCTAATAATCAAATAAATTTTGTTTTTCATGGAGGATC TGGAACAAGTATAATTGACATACAAAAATCAATTGATTATGGAGTAATAAAATTTAATATTGACACAAATATGCAATGGA ATTATTGGAAAGGTGTATTAAATTTTTATAAAAACAATAAAAAATTTTTAAATACTCAATTAGGAAATCCATTAGGAAAA AATCAACCAAATAAAAAATATTACGATCCTAGAGTATGGATCAGATATGCGCAAAAACAATCTATAAAATATTTAAAAAA AATTTTTATACAATTAAATTCGAAAAATACTTTATAA
Upstream 100 bases:
>100_bases AACATTACCTATCATTGAAAAAATAAAAAAACTAAATCAATAGCTATTAAATTTAAAAATTCGATAATATTTTTATATTG ATAGAGGAAGAAAATAAATA
Downstream 100 bases:
>100_bases ATATTTTAAAATTTTTTTTTACTAGAAAAAAAAAAATAATGTATTATATTTTATTTGTATAATCAAAAAAACAAAAAAAA ATTAAATATATATTTCTTTA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MCKILDIIKPGVLNSEEMKIVFLLAKKKKFAIPAINCINTDSINIVLETAAKMRSPVIIQFSYSGSQFFSGLGLNLEEKK KSVIGAISGAKYVHMISKYYKIPVILHTDHCDFNHLYWINDLLSYGKKFFKKKKRPLFSSHMIDLSKETIKKNIILSSKY LKKITELNMMLEIELGCTGGEEDGIDNTNINKKLLYTDTKDIYYAFKKLINISNNFIIAAAFGNIHGVYQPGKISLKLSI LKKAQKYIENITKLPNNQINFVFHGGSGTSIIDIQKSIDYGVIKFNIDTNMQWNYWKGVLNFYKNNKKFLNTQLGNPLGK NQPNKKYYDPRVWIRYAQKQSIKYLKKIFIQLNSKNTL
Sequences:
>Translated_358_residues MCKILDIIKPGVLNSEEMKIVFLLAKKKKFAIPAINCINTDSINIVLETAAKMRSPVIIQFSYSGSQFFSGLGLNLEEKK KSVIGAISGAKYVHMISKYYKIPVILHTDHCDFNHLYWINDLLSYGKKFFKKKKRPLFSSHMIDLSKETIKKNIILSSKY LKKITELNMMLEIELGCTGGEEDGIDNTNINKKLLYTDTKDIYYAFKKLINISNNFIIAAAFGNIHGVYQPGKISLKLSI LKKAQKYIENITKLPNNQINFVFHGGSGTSIIDIQKSIDYGVIKFNIDTNMQWNYWKGVLNFYKNNKKFLNTQLGNPLGK NQPNKKYYDPRVWIRYAQKQSIKYLKKIFIQLNSKNTL >Mature_358_residues MCKILDIIKPGVLNSEEMKIVFLLAKKKKFAIPAINCINTDSINIVLETAAKMRSPVIIQFSYSGSQFFSGLGLNLEEKK KSVIGAISGAKYVHMISKYYKIPVILHTDHCDFNHLYWINDLLSYGKKFFKKKKRPLFSSHMIDLSKETIKKNIILSSKY LKKITELNMMLEIELGCTGGEEDGIDNTNINKKLLYTDTKDIYYAFKKLINISNNFIIAAAFGNIHGVYQPGKISLKLSI LKKAQKYIENITKLPNNQINFVFHGGSGTSIIDIQKSIDYGVIKFNIDTNMQWNYWKGVLNFYKNNKKFLNTQLGNPLGK NQPNKKYYDPRVWIRYAQKQSIKYLKKIFIQLNSKNTL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789293, Length=359, Percent_Identity=52.3676880222841, Blast_Score=427, Evalue=1e-121, Organism=Escherichia coli, GI87082041, Length=290, Percent_Identity=25.8620689655172, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1789526, Length=311, Percent_Identity=24.7588424437299, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=42.1652421652422, Blast_Score=302, Evalue=4e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 41174; Mature: 41174
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKILDIIKPGVLNSEEMKIVFLLAKKKKFAIPAINCINTDSINIVLETAAKMRSPVIIQ CCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEHHHHCCCEEEE FSYSGSQFFSGLGLNLEEKKKSVIGAISGAKYVHMISKYYKIPVILHTDHCDFNHLYWIN EECCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHH DLLSYGKKFFKKKKRPLFSSHMIDLSKETIKKNIILSSKYLKKITELNMMLEIELGCTGG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHHCCEEEEEEECCCCC EEDGIDNTNINKKLLYTDTKDIYYAFKKLINISNNFIIAAAFGNIHGVYQPGKISLKLSI CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCEEEEEHHH LKKAQKYIENITKLPNNQINFVFHGGSGTSIIDIQKSIDYGVIKFNIDTNMQWNYWKGVL HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHH NFYKNNKKFLNTQLGNPLGKNQPNKKYYDPRVWIRYAQKQSIKYLKKIFIQLNSKNTL HHHHCCCEEEEHHCCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MCKILDIIKPGVLNSEEMKIVFLLAKKKKFAIPAINCINTDSINIVLETAAKMRSPVIIQ CCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEHHHHCCCEEEE FSYSGSQFFSGLGLNLEEKKKSVIGAISGAKYVHMISKYYKIPVILHTDHCDFNHLYWIN EECCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHH DLLSYGKKFFKKKKRPLFSSHMIDLSKETIKKNIILSSKYLKKITELNMMLEIELGCTGG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHHCCEEEEEEECCCCC EEDGIDNTNINKKLLYTDTKDIYYAFKKLINISNNFIIAAAFGNIHGVYQPGKISLKLSI CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCEEEEEHHH LKKAQKYIENITKLPNNQINFVFHGGSGTSIIDIQKSIDYGVIKFNIDTNMQWNYWKGVL HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHH NFYKNNKKFLNTQLGNPLGKNQPNKKYYDPRVWIRYAQKQSIKYLKKIFIQLNSKNTL HHHHCCCEEEEHHCCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]