Click here to switch to the map view.

The map label for this gene is ppa [H]

Identifier: 116514996

GI number: 116514996

Start: 57899

End: 58438

Strand: Reverse

Name: ppa [H]

Synonym: BCc_053

Alternate gene names: 116514996

Gene position: 58438-57899 (Counterclockwise)

Preceding gene: 116514997

Following gene: 116514995

Centisome position: 14.03

GC content: 22.96

Gene sequence:

>540_bases
ATGAAAAATATAATAAATGTTCCTGCAGGAAAAAATCCACCTTATGATATATACGGAATTATTGAAATTTCAGCCTTCTC
AAAACCAATAAAATATGAACTAAATAAATCTTTTAATATGTTGTATGTTGATAGATTCATACCAACCACTATGTTTTATC
CATGTAATTATGGATTTATTAATCAAACGCTTTCATTAGATGGAGATCCATTAGATATTTTAGTACCTACTTTATATCCA
ATTCAACCAAAATCAATTATTAGATGTAAACCAATTGGAATGTTAAATATGGAAGATGAATCTGGAATAGATGAAAAAAT
AATAATGGTACCGCATAAAAAAATAACCAATGAATATAAAAAAATCAATGATATTAATGAACTATCTAATTCAATAAAAG
AAAAAATAATTCATTTTTTTCAAAATTACAAAAATTTAGAAAAAAATAAATGGGTAAAAATAAATGGATGGGAAGATTCA
AAAATGGCAAAATCAACAATTATAGATTCTGTAAATAGATATAATCTATGTAATAAATAA

Upstream 100 bases:

>100_bases
ATTATAATTATGATTTTGAAAAACAAATAATAATTTAAATAAACATTTATATGCATAAAAATTTACAAATTATTATTTAT
AATAAAAAATAATATTTAAA

Downstream 100 bases:

>100_bases
TTTTAATTAAAAATTTTCTTACATTAAATAAATACAAAGAATTATTTAAATATATATTTTTTAAAAATTAAATATATTCT
TTATACAAATATTTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKNIINVPAGKNPPYDIYGIIEISAFSKPIKYELNKSFNMLYVDRFIPTTMFYPCNYGFINQTLSLDGDPLDILVPTLYP
IQPKSIIRCKPIGMLNMEDESGIDEKIIMVPHKKITNEYKKINDINELSNSIKEKIIHFFQNYKNLEKNKWVKINGWEDS
KMAKSTIIDSVNRYNLCNK

Sequences:

>Translated_179_residues
MKNIINVPAGKNPPYDIYGIIEISAFSKPIKYELNKSFNMLYVDRFIPTTMFYPCNYGFINQTLSLDGDPLDILVPTLYP
IQPKSIIRCKPIGMLNMEDESGIDEKIIMVPHKKITNEYKKINDINELSNSIKEKIIHFFQNYKNLEKNKWVKINGWEDS
KMAKSTIIDSVNRYNLCNK
>Mature_179_residues
MKNIINVPAGKNPPYDIYGIIEISAFSKPIKYELNKSFNMLYVDRFIPTTMFYPCNYGFINQTLSLDGDPLDILVPTLYP
IQPKSIIRCKPIGMLNMEDESGIDEKIIMVPHKKITNEYKKINDINELSNSIKEKIIHFFQNYKNLEKNKWVKINGWEDS
KMAKSTIIDSVNRYNLCNK

Specific function: Unknown

COG id: COG0221

COG function: function code C; Inorganic pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase family [H]

Homologues:

Organism=Escherichia coli, GI1790673, Length=171, Percent_Identity=57.3099415204678, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008162 [H]

Pfam domain/function: PF00719 Pyrophosphatase [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 20834; Mature: 20834

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIINVPAGKNPPYDIYGIIEISAFSKPIKYELNKSFNMLYVDRFIPTTMFYPCNYGFI
CCCEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCC
NQTLSLDGDPLDILVPTLYPIQPKSIIRCKPIGMLNMEDESGIDEKIIMVPHKKITNEYK
CCEECCCCCCEEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCEEEEECCHHHHHHHH
KINDINELSNSIKEKIIHFFQNYKNLEKNKWVKINGWEDSKMAKSTIIDSVNRYNLCNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKNIINVPAGKNPPYDIYGIIEISAFSKPIKYELNKSFNMLYVDRFIPTTMFYPCNYGFI
CCCEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEECCCCCCC
NQTLSLDGDPLDILVPTLYPIQPKSIIRCKPIGMLNMEDESGIDEKIIMVPHKKITNEYK
CCEECCCCCCEEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCEEEEECCHHHHHHHH
KINDINELSNSIKEKIIHFFQNYKNLEKNKWVKINGWEDSKMAKSTIIDSVNRYNLCNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]