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The map label for this gene is dnaC [H]

Identifier: 116514962

GI number: 116514962

Start: 13484

End: 14221

Strand: Reverse

Name: dnaC [H]

Synonym: BCc_013

Alternate gene names: 116514962

Gene position: 14221-13484 (Counterclockwise)

Preceding gene: 116514963

Following gene: 116514954

Centisome position: 3.42

GC content: 22.36

Gene sequence:

>738_bases
ATGAATAATTTTTTAAAAAAACTAAAAAAAATAATGCCTAAATATATAAAACCAAAATTTTATAATGATAAAGAATTATT
ACTTTGGAATCAAAAACAAGGAAAAAAATATTCACAATCAATTATTCAAAATAATAAAGCAATAAAAATACAAAAAACTT
TAGGAAAATCTGGAATTAAAGAATTATATATGAACTGTTCTTTTGAAAATTATCATATTAATCATAAAGGACATCAAAAA
GTGCTTAATGCATCTCGTAAATATGCAGAAAATTTTAAAAATAGTATTGCGAGTTTCATTTTTTCTGGAAAACCCGGAAC
TGGAAAAAATCATTTAGCAGCAGCTATTGGAAATTATTTAATATTACAAGGAAATAGTGTATTAATAATTACTATAGCTG
ATCTTATGTCATATATTAAAGAAACATTTAATAAAAAAAACACAAATTCTATGACAGAAGAAAAACTATTAAATAACTTT
AGCACAATTGATTTATTAATAATTGATGAAATTGGTATACAATTAAAATCTGAATATGAAAAAATAATTATAAATCAAAT
TATAGATCGAAGATCTTCATCCAAAAAATCTACAGGAATGTTATCAAACTTAACACATGCAGGAATAAAAAATTTACTTG
GAGAAAGAGTTATTGATAGAATGTGCATAGGAAATAGCTTATGGTTAACATTTGAATGGGATAGCTATCGAAAAAATATA
TCTGGAAATGAATATTAA

Upstream 100 bases:

>100_bases
ATAATAAAACTAACTATAAAAAACATATATATAATATTTTTAATAAAAATTAAAAAATATTTAATCTAAATTAGAAATAT
AATAGGAAAAATAATTTATA

Downstream 100 bases:

>100_bases
AATAGTTAATGATAAAAATCATTTATTAACACGTGATATATATTTTCCAATACGAGTATCTATTTTAATATAGTCTCCTT
TTTTAATAAATAAAGGTACT

Product: DNA replication protein DnaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNNFLKKLKKIMPKYIKPKFYNDKELLLWNQKQGKKYSQSIIQNNKAIKIQKTLGKSGIKELYMNCSFENYHINHKGHQK
VLNASRKYAENFKNSIASFIFSGKPGTGKNHLAAAIGNYLILQGNSVLIITIADLMSYIKETFNKKNTNSMTEEKLLNNF
STIDLLIIDEIGIQLKSEYEKIIINQIIDRRSSSKKSTGMLSNLTHAGIKNLLGERVIDRMCIGNSLWLTFEWDSYRKNI
SGNEY

Sequences:

>Translated_245_residues
MNNFLKKLKKIMPKYIKPKFYNDKELLLWNQKQGKKYSQSIIQNNKAIKIQKTLGKSGIKELYMNCSFENYHINHKGHQK
VLNASRKYAENFKNSIASFIFSGKPGTGKNHLAAAIGNYLILQGNSVLIITIADLMSYIKETFNKKNTNSMTEEKLLNNF
STIDLLIIDEIGIQLKSEYEKIIINQIIDRRSSSKKSTGMLSNLTHAGIKNLLGERVIDRMCIGNSLWLTFEWDSYRKNI
SGNEY
>Mature_245_residues
MNNFLKKLKKIMPKYIKPKFYNDKELLLWNQKQGKKYSQSIIQNNKAIKIQKTLGKSGIKELYMNCSFENYHINHKGHQK
VLNASRKYAENFKNSIASFIFSGKPGTGKNHLAAAIGNYLILQGNSVLIITIADLMSYIKETFNKKNTNSMTEEKLLNNF
STIDLLIIDEIGIQLKSEYEKIIINQIIDRRSSSKKSTGMLSNLTHAGIKNLLGERVIDRMCIGNSLWLTFEWDSYRKNI
SGNEY

Specific function: This protein is required for chromosomal replication. It forms, in concert with dnaB protein and other prepriming proteins dnaT, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaC family [H]

Homologues:

Organism=Escherichia coli, GI1790823, Length=245, Percent_Identity=55.1020408163265, Blast_Score=296, Evalue=6e-82,
Organism=Escherichia coli, GI1787623, Length=238, Percent_Identity=37.8151260504202, Blast_Score=216, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 28184; Mature: 28184

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFLKKLKKIMPKYIKPKFYNDKELLLWNQKQGKKYSQSIIQNNKAIKIQKTLGKSGIK
CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEHHHHCHHHHH
ELYMNCSFENYHINHKGHQKVLNASRKYAENFKNSIASFIFSGKPGTGKNHLAAAIGNYL
HHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEE
ILQGNSVLIITIADLMSYIKETFNKKNTNSMTEEKLLNNFSTIDLLIIDEIGIQLKSEYE
EEECCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHH
KIIINQIIDRRSSSKKSTGMLSNLTHAGIKNLLGERVIDRMCIGNSLWLTFEWDSYRKNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCC
SGNEY
CCCCC
>Mature Secondary Structure
MNNFLKKLKKIMPKYIKPKFYNDKELLLWNQKQGKKYSQSIIQNNKAIKIQKTLGKSGIK
CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEHHHHCHHHHH
ELYMNCSFENYHINHKGHQKVLNASRKYAENFKNSIASFIFSGKPGTGKNHLAAAIGNYL
HHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEE
ILQGNSVLIITIADLMSYIKETFNKKNTNSMTEEKLLNNFSTIDLLIIDEIGIQLKSEYE
EEECCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHH
KIIINQIIDRRSSSKKSTGMLSNLTHAGIKNLLGERVIDRMCIGNSLWLTFEWDSYRKNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCC
SGNEY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]