| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yniA [C]
Identifier: 116496265
GI number: 116496265
Start: 2828198
End: 2829067
Strand: Direct
Name: yniA [C]
Synonym: LSEI_2847
Alternate gene names: 116496265
Gene position: 2828198-2829067 (Clockwise)
Preceding gene: 116496264
Following gene: 116496269
Centisome position: 97.68
GC content: 49.31
Gene sequence:
>870_bases ATGCTGACTTCATCTTGGATCAAACAATTACCGCTGACCGCCATCACGCAAGTCACCCCGGTTGGTGGCGGTGACGTCAA TCAGGCATACCGGATCGATACGGCGACAAAGCCTTACTTTTTGCTGGTTCAACCGGGTTATCCTGCTGATTTTTATGCTG GCGAAATAGCTGGCTTAAAAGCATTTGACGAGGCACAAATCTTAGCACCGCGTGTCATTGCTAATGGTCAAATTGAAGGC GATGGTTTTCTGCTACTCAGTTTCCTTACCAGCGGCAATGGGTCGCAACGCGATTTAGGGCGATTAGTCGCGCATTTGCA TCAACATCATGAACCAAATGGCCGATTCGGCTTTGACTACCCTTATGCGGGCACCAGCGTCTCATTTACCAACACCTGGA CCGATTCATGGGCAGATCTATTCATTCACCAACGCTTGGACAAACTCGCCGCACACCTGCTTAAAAAGGAGCTGTGGCAA GCCGACGATGAAGCAACCTTCCAACAGGTGCGCACCATCATCAGCAAAACACTGGCCCATCATCACAGCGATGCTTCCCT GCTGCACGGTGACTTATGGGGTGGCAACTACATGTTTACTGCCGATGGTCAGCCAGCTCTGATTGATCCTGCAGCAGTAT ATGGTGATCGCGAACTCGATATCGGGGTAACGACAGTTTTTGGCGGATTCACCCAAGACTTTTACACTGGCTATCAAGAA GTCTACCCACTTGATGCTGGTTATCACTTCCGCCTTGACTTTTACCGGCTGTATTATCTGATGGTTCATCTTGATAAGTT CGGCATGGGTTACGCTGGCAGTGTGGCCGCAGTGATGAATCAAATTCTCGATCATGGCTTAACTGAATAA
Upstream 100 bases:
>100_bases TGACCCGTTGCAATCACGCACCTGGCTGTTCTAAGGTGGGGGCGAGCGATCTCCAGCGCGGGTAACTACGCTGGAGATCG CGTTAATGAGGAGGAATAAT
Downstream 100 bases:
>100_bases ATCGCTTCGCTATGTATTTTCGAAACGAAAACTATTTCCCAGGAAATTAAAACAGCAAAACGGCCAACCCACTAGTTGAT GGATTGGCCGTTTTGCTATC
Product: fructosamine-3-kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MLTSSWIKQLPLTAITQVTPVGGGDVNQAYRIDTATKPYFLLVQPGYPADFYAGEIAGLKAFDEAQILAPRVIANGQIEG DGFLLLSFLTSGNGSQRDLGRLVAHLHQHHEPNGRFGFDYPYAGTSVSFTNTWTDSWADLFIHQRLDKLAAHLLKKELWQ ADDEATFQQVRTIISKTLAHHHSDASLLHGDLWGGNYMFTADGQPALIDPAAVYGDRELDIGVTTVFGGFTQDFYTGYQE VYPLDAGYHFRLDFYRLYYLMVHLDKFGMGYAGSVAAVMNQILDHGLTE
Sequences:
>Translated_289_residues MLTSSWIKQLPLTAITQVTPVGGGDVNQAYRIDTATKPYFLLVQPGYPADFYAGEIAGLKAFDEAQILAPRVIANGQIEG DGFLLLSFLTSGNGSQRDLGRLVAHLHQHHEPNGRFGFDYPYAGTSVSFTNTWTDSWADLFIHQRLDKLAAHLLKKELWQ ADDEATFQQVRTIISKTLAHHHSDASLLHGDLWGGNYMFTADGQPALIDPAAVYGDRELDIGVTTVFGGFTQDFYTGYQE VYPLDAGYHFRLDFYRLYYLMVHLDKFGMGYAGSVAAVMNQILDHGLTE >Mature_289_residues MLTSSWIKQLPLTAITQVTPVGGGDVNQAYRIDTATKPYFLLVQPGYPADFYAGEIAGLKAFDEAQILAPRVIANGQIEG DGFLLLSFLTSGNGSQRDLGRLVAHLHQHHEPNGRFGFDYPYAGTSVSFTNTWTDSWADLFIHQRLDKLAAHLLKKELWQ ADDEATFQQVRTIISKTLAHHHSDASLLHGDLWGGNYMFTADGQPALIDPAAVYGDRELDIGVTTVFGGFTQDFYTGYQE VYPLDAGYHFRLDFYRLYYLMVHLDKFGMGYAGSVAAVMNQILDHGLTE
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=307, Percent_Identity=26.7100977198697, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI11545906, Length=290, Percent_Identity=26.2068965517241, Blast_Score=95, Evalue=8e-20, Organism=Escherichia coli, GI1788019, Length=277, Percent_Identity=29.9638989169675, Blast_Score=103, Evalue=2e-23, Organism=Caenorhabditis elegans, GI212659227, Length=175, Percent_Identity=33.7142857142857, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: NA
Molecular weight: Translated: 32147; Mature: 32147
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSSWIKQLPLTAITQVTPVGGGDVNQAYRIDTATKPYFLLVQPGYPADFYAGEIAGLK CCCHHHHHHCCHHHHHEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHCCC AFDEAQILAPRVIANGQIEGDGFLLLSFLTSGNGSQRDLGRLVAHLHQHHEPNGRFGFDY CCCCHHHHCCHHEECCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PYAGTSVSFTNTWTDSWADLFIHQRLDKLAAHLLKKELWQADDEATFQQVRTIISKTLAH CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HHSDASLLHGDLWGGNYMFTADGQPALIDPAAVYGDRELDIGVTTVFGGFTQDFYTGYQE CCCCCCEEECEECCCCEEEECCCCCCEECHHHHCCCCCCCCCCEEHHCCHHHHHHCCHHH VYPLDAGYHFRLDFYRLYYLMVHLDKFGMGYAGSVAAVMNQILDHGLTE EEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTSSWIKQLPLTAITQVTPVGGGDVNQAYRIDTATKPYFLLVQPGYPADFYAGEIAGLK CCCHHHHHHCCHHHHHEECCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHCCC AFDEAQILAPRVIANGQIEGDGFLLLSFLTSGNGSQRDLGRLVAHLHQHHEPNGRFGFDY CCCCHHHHCCHHEECCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC PYAGTSVSFTNTWTDSWADLFIHQRLDKLAAHLLKKELWQADDEATFQQVRTIISKTLAH CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HHSDASLLHGDLWGGNYMFTADGQPALIDPAAVYGDRELDIGVTTVFGGFTQDFYTGYQE CCCCCCEEECEECCCCEEEECCCCCCEECHHHHCCCCCCCCCCEEHHCCHHHHHHCCHHH VYPLDAGYHFRLDFYRLYYLMVHLDKFGMGYAGSVAAVMNQILDHGLTE EEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]