Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494334

Identifier: 116494334

GI number: 116494334

Start: 785826

End: 786362

Strand: Direct

Name: 116494334

Synonym: LSEI_0790

Alternate gene names: NA

Gene position: 785826-786362 (Clockwise)

Preceding gene: 116494333

Following gene: 116494335

Centisome position: 27.14

GC content: 46.0

Gene sequence:

>537_bases
GTGTTGATTTCATTATCGATTATTTTAATTTTGGCTTATTTCTATTATAGCGGCGCGCGTCGTGGTGCGGCGTTGCAGTG
GTTGCATGTGGCCGGTTATGGGTTGAGCTTTCTTGCTGCAACTGCACTTGCTCGGCCACTGGGGGCGCATTTTACTTTGG
TAGTGCCTTACCCGTCTGCTACGAATGCCGGTCAGTTTGCATTTTATTCAGATAAAGTCGGCTTGACGCTTGATACCGCA
TTTTATCGCGGCTTTGCTTTTTTAGTCGTGCTGACGTTTGGCTGGTTATTAACTCGAGTAGGGGCATTGTGGTTTCACGA
CTTGACATATGCCGCAATGGGTCATCGACGCAGTGCCATTATTGGCGGCTGTGCTAATTTAGTGATTGGTTACATTTTTC
TGTTTTTGATTTTAGCCTTGCTGGCATTGATTCCGATTGCCGGTATTCAACATGGCTTAGACCATGCCATCGTTGCCAAG
GTCATGATCAAATATTCGCCAGGGCTAACACAATTTGTGAATGCTTTGTGGCTATGA

Upstream 100 bases:

>100_bases
GGAACAAGCCATTTTAGTTGCCTTCAATTCTGTTTCCGATCAGGTCAAACTGTTGGCGGCGCAACAGGATGATCATGAGC
AGGAAGAGTAGTGGGGGACC

Downstream 100 bases:

>100_bases
ATGTTGACGACGCTCAGGGACGATTTATCACGTCTTTGAGCGCTTCTTGGTTATAGGAGCAATTATTTATGAATGAAAAG
ATTTTAAAAACCCTTGAATA

Product: membrane ancor connecting MutS2 with cell-division Z-ring

Products: NA

Alternate protein names: Integral Membrane Protein; CvpA Family Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLISLSIILILAYFYYSGARRGAALQWLHVAGYGLSFLAATALARPLGAHFTLVVPYPSATNAGQFAFYSDKVGLTLDTA
FYRGFAFLVVLTFGWLLTRVGALWFHDLTYAAMGHRRSAIIGGCANLVIGYIFLFLILALLALIPIAGIQHGLDHAIVAK
VMIKYSPGLTQFVNALWL

Sequences:

>Translated_178_residues
MLISLSIILILAYFYYSGARRGAALQWLHVAGYGLSFLAATALARPLGAHFTLVVPYPSATNAGQFAFYSDKVGLTLDTA
FYRGFAFLVVLTFGWLLTRVGALWFHDLTYAAMGHRRSAIIGGCANLVIGYIFLFLILALLALIPIAGIQHGLDHAIVAK
VMIKYSPGLTQFVNALWL
>Mature_178_residues
MLISLSIILILAYFYYSGARRGAALQWLHVAGYGLSFLAATALARPLGAHFTLVVPYPSATNAGQFAFYSDKVGLTLDTA
FYRGFAFLVVLTFGWLLTRVGALWFHDLTYAAMGHRRSAIIGGCANLVIGYIFLFLILALLALIPIAGIQHGLDHAIVAK
VMIKYSPGLTQFVNALWL

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19400; Mature: 19400

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLSIILILAYFYYSGARRGAALQWLHVAGYGLSFLAATALARPLGAHFTLVVPYPSA
CEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TNAGQFAFYSDKVGLTLDTAFYRGFAFLVVLTFGWLLTRVGALWFHDLTYAAMGHRRSAI
CCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IGGCANLVIGYIFLFLILALLALIPIAGIQHGLDHAIVAKVMIKYSPGLTQFVNALWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MLISLSIILILAYFYYSGARRGAALQWLHVAGYGLSFLAATALARPLGAHFTLVVPYPSA
CEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
TNAGQFAFYSDKVGLTLDTAFYRGFAFLVVLTFGWLLTRVGALWFHDLTYAAMGHRRSAI
CCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IGGCANLVIGYIFLFLILALLALIPIAGIQHGLDHAIVAKVMIKYSPGLTQFVNALWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA