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The map label for this gene is 116494332

Identifier: 116494332

GI number: 116494332

Start: 784875

End: 785195

Strand: Direct

Name: 116494332

Synonym: LSEI_0788

Alternate gene names: NA

Gene position: 784875-785195 (Clockwise)

Preceding gene: 116494331

Following gene: 116494333

Centisome position: 27.11

GC content: 44.55

Gene sequence:

>321_bases
ATGGCAAATAATGAACATGTAACGCCCGGCGAAGACGATCAGCAGATTACGCTGATTGACGAAAAAGGCAATGAAGAATT
GTATCAGGTCTTGTTCACATTTGATTCGGAAGATTATGGCAAGAGTTACGTATTGCTGTATCCGGCGAGTGAAAGTGACG
ATCAGGAAGTCGAAATTCAGGCTTTCTCATTTACCCCCGACGAAAATGGCGATGCCAGCTCGGGCGATCTTTTCCCGATT
GATGACGATGCTGAATGGGATATGGTTGAGGAAGTTTTGAACACTTTCTTGGCCGACGACGATTCGAATCTGAAAGATTA
A

Upstream 100 bases:

>100_bases
ATGATTCTCCAGAATTATCTGGATGCAAAAGGTCCCTTGACCAAGCAATAATCAGGGCAAGTGATGGCATGACCTCCGCC
CGTGTTGAAGGAGAAACAAG

Downstream 100 bases:

>100_bases
GTCTTAACTCATGGCATGTAAGACCACCAGAATATTGGTGGTCTTTTTGTAGAGCGCGAGCCAGCCCGGTTAGAAACCGG
AGTGTAAGCGGACCTGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MANNEHVTPGEDDQQITLIDEKGNEELYQVLFTFDSEDYGKSYVLLYPASESDDQEVEIQAFSFTPDENGDASSGDLFPI
DDDAEWDMVEEVLNTFLADDDSNLKD

Sequences:

>Translated_106_residues
MANNEHVTPGEDDQQITLIDEKGNEELYQVLFTFDSEDYGKSYVLLYPASESDDQEVEIQAFSFTPDENGDASSGDLFPI
DDDAEWDMVEEVLNTFLADDDSNLKD
>Mature_105_residues
ANNEHVTPGEDDQQITLIDEKGNEELYQVLFTFDSEDYGKSYVLLYPASESDDQEVEIQAFSFTPDENGDASSGDLFPID
DDAEWDMVEEVLNTFLADDDSNLKD

Specific function: Unknown

COG id: COG3906

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0473 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y788_LACC3 (Q03AZ8)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806066.1
- STRING:   Q03AZ8
- GeneID:   4419376
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_0788
- eggNOG:   COG3906
- HOGENOM:   HBG726191
- OMA:   GNEQLCE
- ProtClustDB:   PRK13678
- BioCyc:   LCAS321967:LSEI_0788-MONOMER
- HAMAP:   MF_01448
- InterPro:   IPR009711

Pfam domain/function: PF06949 DUF1292

EC number: NA

Molecular weight: Translated: 11968; Mature: 11836

Theoretical pI: Translated: 3.23; Mature: 3.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNEHVTPGEDDQQITLIDEKGNEELYQVLFTFDSEDYGKSYVLLYPASESDDQEVEIQ
CCCCCCCCCCCCCCEEEEEECCCCHHEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEE
AFSFTPDENGDASSGDLFPIDDDAEWDMVEEVLNTFLADDDSNLKD
EEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ANNEHVTPGEDDQQITLIDEKGNEELYQVLFTFDSEDYGKSYVLLYPASESDDQEVEIQ
CCCCCCCCCCCCCEEEEEECCCCHHEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEE
AFSFTPDENGDASSGDLFPIDDDAEWDMVEEVLNTFLADDDSNLKD
EEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA