| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is cshB [H]
Identifier: 116494326
GI number: 116494326
Start: 778274
End: 779620
Strand: Direct
Name: cshB [H]
Synonym: LSEI_0782
Alternate gene names: 116494326
Gene position: 778274-779620 (Clockwise)
Preceding gene: 116494325
Following gene: 116494327
Centisome position: 26.88
GC content: 47.44
Gene sequence:
>1347_bases ATGGAGAATCAATTCAAACAATTTCAACTAAAACCTTTTGTTATCGATGGTCTCAATGCAATGGCCATCACCGCCCCGAC ACCCATTCAACAAAAAGTTATTCCAGCGCTTTTGCGTGGTGAAAACATTGTTGGGCAAAGCCAGACCGGTAGCGGGAAAA CTCACGCCTTTTTGGTACCCTTACTCAGTATGGTAGATCCTACCGAAGATGCGACTCAGGTCGTGATCACTGCCCCTTCA CGTGAGTTAGCCAATCAAATTTATGCGGTTGCCCAGCAACTCATACAAACTGAGCCGGTGATTCGGATTAACCGTTTAGT CGGGGGAATGGACAAGCAAAAGCAGATCGACAAGTTGCAAAATCATCAACCACATGTGGCTATCGGAACGCCAGGTCGAA TCTTAGACATGATCAAAAGCTATGATTTAGTGCCATCGTCTGTCCGTCATTTTGTAGTCGACGAAGCTGACATGACGCTG GATATGGGCTTCCTCGAAACGGTTGATGCGATTGCCTCGAGTTTTCCAGATCATCTGCAAATGGCTGTTTTTTCGGCGAC TATTCCGCAAAAACTGGAACCATTCTTGCGCAAGTACATGGATAATCCAACGACGATTGAATTGAAACCGCAGTCGGTGA TTGCTGACACGGTTGAAAATATTTTGATTGCGGCAAAAGGGCGCGATAAAAATGAGTTAATCTATCAGCTTGTCACGATG GGGCATCCCTTTTTAGTGCTGATTTTTGCTAACACCAAGACCAGCGTGGATGCTATCCATGACTTCTTGAAGCATCAAGG TTTGAAGGTGGCCAAGATTCATGGTGGCATTCAGCCGCGAGAACGTCGGCGCGTGATGAAGGATGTTGCCGACCTCAAAT ATCAGTATGTGGTCGCCACTGATCTTGCTGCTCGGGGTATCGATATCAAGGGGGTCTCAATGGTCATCAATGCCGAGATT CCCCGCGACAACGAGTTCTTTATTCACCGAGTGGGCCGAACCGGTCGGAATGGCATGGCTGGTACAGCGGTGACACTGTA CGAACCGGGACAGGAAGATCAAATTGCCGAATTAGAGCATATGGGCATTAAGTTTGCGCCGAAAATGATCAAAAACGGTG AGCTTGTCGACACTTATGACCGCAATCGTCGAGTTCACCGCAAACCGAAGCAAGAAGACACCAGTCTTGCGATTCGCGGT CTGGTGAAAAAGGCAAAGCAAAAGCACATGCCGAATTATCGTAAAAAGATTCGAACTGCGGTGTTATTAGAACGCAAACG AAATACCAAAATTGCTCGGCGCCAAGCGCTGTTAGCAGAAAAACGCAAGAACCGCAAACGAGGGTGA
Upstream 100 bases:
>100_bases CAAGCGGCGCTAAGGCAGCTAATTTTGACGAACTGATTCAAATCGAGACGCAACTCGATCAACTGGTCAAAGAATATTCG ACCTCAGGAAAGTAGGCATT
Downstream 100 bases:
>100_bases GCATATGGCAGTCAACGACCTGACCCTGCCGACCTGGAACACGCTGGATGAAGCGCGGCAGAAGTTTATTTTTCAGCAAC TCACACGATACTTTCTAAGT
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVPLLSMVDPTEDATQVVITAPS RELANQIYAVAQQLIQTEPVIRINRLVGGMDKQKQIDKLQNHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTL DMGFLETVDAIASSFPDHLQMAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVATDLAARGIDIKGVSMVINAEI PRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEHMGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRG LVKKAKQKHMPNYRKKIRTAVLLERKRNTKIARRQALLAEKRKNRKRG
Sequences:
>Translated_448_residues MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVPLLSMVDPTEDATQVVITAPS RELANQIYAVAQQLIQTEPVIRINRLVGGMDKQKQIDKLQNHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTL DMGFLETVDAIASSFPDHLQMAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVATDLAARGIDIKGVSMVINAEI PRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEHMGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRG LVKKAKQKHMPNYRKKIRTAVLLERKRNTKIARRQALLAEKRKNRKRG >Mature_448_residues MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVPLLSMVDPTEDATQVVITAPS RELANQIYAVAQQLIQTEPVIRINRLVGGMDKQKQIDKLQNHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTL DMGFLETVDAIASSFPDHLQMAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVATDLAARGIDIKGVSMVINAEI PRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEHMGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRG LVKKAKQKHMPNYRKKIRTAVLLERKRNTKIARRQALLAEKRKNRKRG
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=32.7731092436975, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI7661920, Length=347, Percent_Identity=31.700288184438, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI188035877, Length=399, Percent_Identity=31.328320802005, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=31.1345646437995, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=31.2849162011173, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI21040371, Length=344, Percent_Identity=29.0697674418605, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI164664518, Length=344, Percent_Identity=31.1046511627907, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=31.2849162011173, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI256223453, Length=452, Percent_Identity=30.0884955752212, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI4503529, Length=332, Percent_Identity=30.421686746988, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=332, Percent_Identity=30.421686746988, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=30.8943089430894, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=30.8943089430894, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=30.8943089430894, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI13129006, Length=383, Percent_Identity=33.1592689295039, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=31.1827956989247, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=31.1827956989247, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI224593278, Length=351, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI4758112, Length=344, Percent_Identity=28.4883720930233, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI18375623, Length=344, Percent_Identity=28.4883720930233, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI41327773, Length=425, Percent_Identity=29.4117647058824, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI50659095, Length=383, Percent_Identity=31.8537859007833, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=33.0601092896175, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=33.0601092896175, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI148613856, Length=387, Percent_Identity=31.7829457364341, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI38201710, Length=387, Percent_Identity=31.7829457364341, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI62241022, Length=340, Percent_Identity=31.1764705882353, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=31.6804407713499, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI41327779, Length=368, Percent_Identity=30.9782608695652, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI31542656, Length=352, Percent_Identity=31.25, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=30.3977272727273, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=30.3977272727273, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI164419732, Length=352, Percent_Identity=31.5340909090909, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=31.25, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=29.6195652173913, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=30.2197802197802, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=29.6195652173913, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=29.6195652173913, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=29.6195652173913, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=28.6127167630058, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=28.2967032967033, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI38569503, Length=335, Percent_Identity=31.044776119403, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI38569505, Length=335, Percent_Identity=31.044776119403, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=27.3775216138329, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI38327634, Length=336, Percent_Identity=29.4642857142857, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=28.2548476454294, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=30.2631578947368, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=25.7575757575758, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI9966805, Length=310, Percent_Identity=29.3548387096774, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI154759257, Length=402, Percent_Identity=25.8706467661692, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI17505907, Length=215, Percent_Identity=29.7674418604651, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=29.7674418604651, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4826686, Length=109, Percent_Identity=33.0275229357798, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI87082221, Length=348, Percent_Identity=34.1954022988506, Blast_Score=225, Evalue=6e-60, Organism=Escherichia coli, GI1787605, Length=340, Percent_Identity=33.8235294117647, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=31.6353887399464, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1790214, Length=355, Percent_Identity=32.6760563380282, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1788930, Length=338, Percent_Identity=29.585798816568, Blast_Score=149, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=32.9512893982808, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507121, Length=349, Percent_Identity=32.6647564469914, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=31.2849162011173, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71982858, Length=344, Percent_Identity=30.2325581395349, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17507945, Length=338, Percent_Identity=32.5443786982249, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=32.5714285714286, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=29.7994269340974, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=29.7994269340974, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=33.9031339031339, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=30.958904109589, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=29.9191374663073, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=30.958904109589, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=30.958904109589, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17552114, Length=348, Percent_Identity=29.5977011494253, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=29.9145299145299, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=30.6010928961749, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=29.0697674418605, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17510559, Length=376, Percent_Identity=28.7234042553192, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=30.8539944903581, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI115532548, Length=355, Percent_Identity=29.2957746478873, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17536099, Length=369, Percent_Identity=29.5392953929539, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115532546, Length=355, Percent_Identity=29.2957746478873, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=29.5392953929539, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=30.1204819277108, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17536103, Length=378, Percent_Identity=29.3650793650794, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=27.6243093922652, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17507641, Length=393, Percent_Identity=27.735368956743, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=28.0748663101604, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17505370, Length=346, Percent_Identity=27.4566473988439, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17509811, Length=370, Percent_Identity=25.9459459459459, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17507877, Length=350, Percent_Identity=28.8571428571429, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17507879, Length=362, Percent_Identity=29.8342541436464, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25148203, Length=462, Percent_Identity=26.6233766233766, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=27.5401069518717, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=28.7262872628726, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17556951, Length=326, Percent_Identity=27.3006134969325, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=31.6582914572864, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=26.9230769230769, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI193208216, Length=401, Percent_Identity=27.1820448877805, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25148205, Length=386, Percent_Identity=25.9067357512953, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71997889, Length=375, Percent_Identity=24.8, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=23.4234234234234, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71987152, Length=90, Percent_Identity=36.6666666666667, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=31.9261213720317, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=355, Percent_Identity=32.6760563380282, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=33.0623306233062, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=32.5779036827195, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=35.3801169590643, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=30.5785123966942, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6325138, Length=383, Percent_Identity=30.2872062663185, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6320041, Length=346, Percent_Identity=31.7919075144509, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=447, Percent_Identity=27.7404921700224, Blast_Score=173, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=28.169014084507, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=29.2011019283747, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=402, Percent_Identity=32.3383084577114, Blast_Score=163, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=29.6703296703297, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322912, Length=327, Percent_Identity=29.3577981651376, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6322323, Length=327, Percent_Identity=29.3577981651376, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323947, Length=352, Percent_Identity=28.6931818181818, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=369, Percent_Identity=30.8943089430894, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319714, Length=350, Percent_Identity=28.5714285714286, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=30.2777777777778, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=381, Percent_Identity=29.1338582677165, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6319618, Length=451, Percent_Identity=27.0509977827051, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6320173, Length=237, Percent_Identity=34.1772151898734, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6323306, Length=314, Percent_Identity=23.8853503184713, Blast_Score=102, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=34.7826086956522, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=24.2937853107345, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6321374, Length=368, Percent_Identity=25.2717391304348, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24645031, Length=347, Percent_Identity=32.5648414985591, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI17977678, Length=374, Percent_Identity=33.4224598930481, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=32.8729281767956, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581954, Length=399, Percent_Identity=28.5714285714286, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24581952, Length=399, Percent_Identity=28.5714285714286, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24581956, Length=399, Percent_Identity=28.5714285714286, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=32.2766570605187, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24584994, Length=368, Percent_Identity=32.3369565217391, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI21356161, Length=418, Percent_Identity=30.622009569378, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=31.7808219178082, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24644479, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=31.7808219178082, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24583281, Length=344, Percent_Identity=30.8139534883721, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24583279, Length=344, Percent_Identity=30.8139534883721, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=31.5642458100559, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=30.9859154929577, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI17985987, Length=380, Percent_Identity=30, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582080, Length=333, Percent_Identity=30.03003003003, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582078, Length=333, Percent_Identity=30.03003003003, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136248, Length=333, Percent_Identity=30.03003003003, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582075, Length=333, Percent_Identity=30.03003003003, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=30.0813008130081, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=31.4447592067989, Blast_Score=165, Evalue=5e-41, Organism=Drosophila melanogaster, GI24642151, Length=348, Percent_Identity=31.0344827586207, Blast_Score=165, Evalue=5e-41, Organism=Drosophila melanogaster, GI24585582, Length=413, Percent_Identity=29.7820823244552, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=28.6908077994429, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24662330, Length=351, Percent_Identity=32.4786324786325, Blast_Score=159, Evalue=4e-39, Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=29.2613636363636, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=29.2613636363636, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24666101, Length=441, Percent_Identity=29.7052154195011, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24668515, Length=364, Percent_Identity=28.021978021978, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI21355559, Length=347, Percent_Identity=28.8184438040346, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI28571338, Length=444, Percent_Identity=25.2252252252252, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI18859659, Length=444, Percent_Identity=25.2252252252252, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=26.1333333333333, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=28.8888888888889, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24643725, Length=380, Percent_Identity=25.2631578947368, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=26.7045454545455, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=22.4489795918367, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=23.7822349570201, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50433; Mature: 50433
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVP CCCCCCCEECCEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LLSMVDPTEDATQVVITAPSRELANQIYAVAQQLIQTEPVIRINRLVGGMDKQKQIDKLQ HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH NHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTLDMGFLETVDAIASSFPDHLQ CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHEECCCCCEECHHHHHHHHHHHHCCCHHHH MAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM HHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHEEEEECCCCHHHHHHHHHHC GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVAT CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEE DLAARGIDIKGVSMVINAEIPRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEH HHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH MGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA CCCHHHHHHHCCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLLERKRNTKIARRQALLAEKRKNRKRG HHHHHHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVP CCCCCCCEECCEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LLSMVDPTEDATQVVITAPSRELANQIYAVAQQLIQTEPVIRINRLVGGMDKQKQIDKLQ HHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH NHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTLDMGFLETVDAIASSFPDHLQ CCCCEEEECCCHHHHHHHHHCCCCHHHHHHHEECCCCCEECHHHHHHHHHHHHCCCHHHH MAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM HHHHHHCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHEEEEECCCCHHHHHHHHHHC GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVAT CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEE DLAARGIDIKGVSMVINAEIPRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEH HHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH MGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA CCCHHHHHHHCCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLLERKRNTKIARRQALLAEKRKNRKRG HHHHHHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]