| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494296
Identifier: 116494296
GI number: 116494296
Start: 749725
End: 750246
Strand: Direct
Name: 116494296
Synonym: LSEI_0752
Alternate gene names: NA
Gene position: 749725-750246 (Clockwise)
Preceding gene: 116494295
Following gene: 116494297
Centisome position: 25.89
GC content: 48.28
Gene sequence:
>522_bases ATGCCAGTTATGTTAATGCGTACTGCTACCCGAGAAGATATTCCCGCGATGATGAAGATTATTGCTTCTGCTCGGCAATT TTTGGGCGAACAAGGTATTTCACAATGGCAAGGAACCTATCCCGATCAGGCTGCGGTTGAACAAGATGTAGCGACAGGCA TCGGGCGAGTTTTGGTCGTTGATGGGCAGGTTGCCGGCATAGCCGCTTTGGTGGAAGGGCCTGATCCGCATTATCTCAAA ATTGATGGTGCTGGTTGGTTGGCCGATGTGCCCTATTTGGCAGTTCATCGATTTGCGCTTGATGGCAGCATTCGTGGTCA TCAATTAAGTAAAGTTTTCTTTAGTAATATTATGAGTGAAGCCTATCGACGCGGTGTCTATGACCTGCGCGTGGATACGC ATGCCCAAAATGTGATCATGCAGCATGCCATCACCGGAATGGGCTTCGAATATCGCGGCATTGTTTACATGGATGAACCG GTTCCTGAACGCAATGCTTATGAGGTTCGTTTGGCACACTAA
Upstream 100 bases:
>100_bases TACTAACCACAAAAACTGCCGCGAACTTTTATGCGCTGTCATTGAAACGGGCGACAAGATGCGGGACAATGGGTGCACGA TAATTTAGGAGATGATGTTG
Downstream 100 bases:
>100_bases CAGAAAGACACGAAATGGAGGAGATCGACATGCAGGACATTGGCAATTTGGCACTGATCTTAGTCACAACGCTGGTTTTA GCGCATTTAAGCCGATTGTT
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; GNAT Family N-Acetyltransferase; GNAT Family Acetyltransferase; Histone Acetyltransferase; Serine O-Acetyltransferase CysE; Serine O-Acetyltransferase; Peptidyl-TRNA Hydrolase
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPVMLMRTATREDIPAMMKIIASARQFLGEQGISQWQGTYPDQAAVEQDVATGIGRVLVVDGQVAGIAALVEGPDPHYLK IDGAGWLADVPYLAVHRFALDGSIRGHQLSKVFFSNIMSEAYRRGVYDLRVDTHAQNVIMQHAITGMGFEYRGIVYMDEP VPERNAYEVRLAH
Sequences:
>Translated_173_residues MPVMLMRTATREDIPAMMKIIASARQFLGEQGISQWQGTYPDQAAVEQDVATGIGRVLVVDGQVAGIAALVEGPDPHYLK IDGAGWLADVPYLAVHRFALDGSIRGHQLSKVFFSNIMSEAYRRGVYDLRVDTHAQNVIMQHAITGMGFEYRGIVYMDEP VPERNAYEVRLAH >Mature_172_residues PVMLMRTATREDIPAMMKIIASARQFLGEQGISQWQGTYPDQAAVEQDVATGIGRVLVVDGQVAGIAALVEGPDPHYLKI DGAGWLADVPYLAVHRFALDGSIRGHQLSKVFFSNIMSEAYRRGVYDLRVDTHAQNVIMQHAITGMGFEYRGIVYMDEPV PERNAYEVRLAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19203; Mature: 19072
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVMLMRTATREDIPAMMKIIASARQFLGEQGISQWQGTYPDQAAVEQDVATGIGRVLVV CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHCCCEEEEE DGQVAGIAALVEGPDPHYLKIDGAGWLADVPYLAVHRFALDGSIRGHQLSKVFFSNIMSE CCCEEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AYRRGVYDLRVDTHAQNVIMQHAITGMGFEYRGIVYMDEPVPERNAYEVRLAH HHHCCCEEEEECHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure PVMLMRTATREDIPAMMKIIASARQFLGEQGISQWQGTYPDQAAVEQDVATGIGRVLVV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHCCCEEEEE DGQVAGIAALVEGPDPHYLKIDGAGWLADVPYLAVHRFALDGSIRGHQLSKVFFSNIMSE CCCEEEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AYRRGVYDLRVDTHAQNVIMQHAITGMGFEYRGIVYMDEPVPERNAYEVRLAH HHHCCCEEEEECHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA