| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is corA [H]
Identifier: 116494283
GI number: 116494283
Start: 734873
End: 735808
Strand: Direct
Name: corA [H]
Synonym: LSEI_0738
Alternate gene names: 116494283
Gene position: 734873-735808 (Clockwise)
Preceding gene: 116494279
Following gene: 116494285
Centisome position: 25.38
GC content: 47.12
Gene sequence:
>936_bases ATGATTACGCGTTATCAGATCCAGCCACGAGGAAATATGCAGGTAACCACAGACGATCAGGCTAACTGGATTCGAGTTTC GGCGCCGTTGCCTCAAGAACTACAGACGCTGGCGACGACATACGGGCTGCCAGCAACCTATCTGGCGGCAGCAACCGATC AACATGAAAATGCACGAGTGGAAGGCTTAAATCCGGCAGATCAGGTACCAGGGTTGATTGTTTTGCGTTACCCGGTTGAA ACGACTAGTGAAACGGGGTTTGATCAATACAATACGGTACCTATGACCATGATTCTACTGAATGATCGTGTGATCACGAT TACCCACGATCCCTTACAAGCTTTCGATGATTTGGCTCAACAAAAACTTTCTCCTAAGCCTGAAGAGTTTGCACTGGAAG TCCTGTGGTTGGTGCTGCATCAATTCGTGATTGCAATGGACAAGCTGAATGATGAAACCAAGCAAATTGAGCGCAGCTTA GGTAAGGCGGCCAAAAACACGCAACTTTATCAGTTGATGGCCATGCAAAAAGGGCTGGTGTTCTTTGATGCGGCCTTGGA TCATTCTGGTACGCTGCTTAAAGCCTTACGCGACGGTGAGCGCTTTTTTAATACGAATGGGTACTTACGGCGGTTGCATG ATGTTGAAGTTGAAGTGGTCGAGGCTCAAACGATGGTTCGGATCACCGAGAAGTTGCTGACGCAGTATTCAACTGCCGTG AGTGCCATTGTTTCGAATAATTTAAATTTGATTATGAAGGTGTTAACTAGCATCACAATTATTTTGACGATTCCAACCAT TGTGGGTGGTATATATGGCATGAATGTTCGCTTACCGTTTGCCAACGCTTACTGGGCTTTTTGGTGGTTAATCGGCGGCA CAGCCATCTTGTGCGGCTTGGCGGCATGGTGGTTGTGGCGTCAGGATTACTTTTAG
Upstream 100 bases:
>100_bases GTGTGAGCATTTTGGACGGGATTGGCATCGCGGACAAGGGTGCATACAGAACGGCCTCTGCGCCAGTAAACGCGCTTTAA TACGGCCAAGAGGTGTTGAA
Downstream 100 bases:
>100_bases CATTAGGTACTTTGAAAATGGGTGTACAAATCCCCGTGACGTATCGCTATCGTCACGGGGATTTTGTGTGCGTCCGTCAG CCTGAGTAGAAACCGGCGCA
Product: Mg2+ and Co2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MITRYQIQPRGNMQVTTDDQANWIRVSAPLPQELQTLATTYGLPATYLAAATDQHENARVEGLNPADQVPGLIVLRYPVE TTSETGFDQYNTVPMTMILLNDRVITITHDPLQAFDDLAQQKLSPKPEEFALEVLWLVLHQFVIAMDKLNDETKQIERSL GKAAKNTQLYQLMAMQKGLVFFDAALDHSGTLLKALRDGERFFNTNGYLRRLHDVEVEVVEAQTMVRITEKLLTQYSTAV SAIVSNNLNLIMKVLTSITIILTIPTIVGGIYGMNVRLPFANAYWAFWWLIGGTAILCGLAAWWLWRQDYF
Sequences:
>Translated_311_residues MITRYQIQPRGNMQVTTDDQANWIRVSAPLPQELQTLATTYGLPATYLAAATDQHENARVEGLNPADQVPGLIVLRYPVE TTSETGFDQYNTVPMTMILLNDRVITITHDPLQAFDDLAQQKLSPKPEEFALEVLWLVLHQFVIAMDKLNDETKQIERSL GKAAKNTQLYQLMAMQKGLVFFDAALDHSGTLLKALRDGERFFNTNGYLRRLHDVEVEVVEAQTMVRITEKLLTQYSTAV SAIVSNNLNLIMKVLTSITIILTIPTIVGGIYGMNVRLPFANAYWAFWWLIGGTAILCGLAAWWLWRQDYF >Mature_311_residues MITRYQIQPRGNMQVTTDDQANWIRVSAPLPQELQTLATTYGLPATYLAAATDQHENARVEGLNPADQVPGLIVLRYPVE TTSETGFDQYNTVPMTMILLNDRVITITHDPLQAFDDLAQQKLSPKPEEFALEVLWLVLHQFVIAMDKLNDETKQIERSL GKAAKNTQLYQLMAMQKGLVFFDAALDHSGTLLKALRDGERFFNTNGYLRRLHDVEVEVVEAQTMVRITEKLLTQYSTAV SAIVSNNLNLIMKVLTSITIILTIPTIVGGIYGMNVRLPFANAYWAFWWLIGGTAILCGLAAWWLWRQDYF
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 35181; Mature: 35181
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRYQIQPRGNMQVTTDDQANWIRVSAPLPQELQTLATTYGLPATYLAAATDQHENARV CCCEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE EGLNPADQVPGLIVLRYPVETTSETGFDQYNTVPMTMILLNDRVITITHDPLQAFDDLAQ CCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHH QKLSPKPEEFALEVLWLVLHQFVIAMDKLNDETKQIERSLGKAAKNTQLYQLMAMQKGLV HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCE FFDAALDHSGTLLKALRDGERFFNTNGYLRRLHDVEVEVVEAQTMVRITEKLLTQYSTAV EEEEHHCCCCHHHHHHHCCHHHCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHH SAIVSNNLNLIMKVLTSITIILTIPTIVGGIYGMNVRLPFANAYWAFWWLIGGTAILCGL HHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH AAWWLWRQDYF HHHHHHHHCCC >Mature Secondary Structure MITRYQIQPRGNMQVTTDDQANWIRVSAPLPQELQTLATTYGLPATYLAAATDQHENARV CCCEEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE EGLNPADQVPGLIVLRYPVETTSETGFDQYNTVPMTMILLNDRVITITHDPLQAFDDLAQ CCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHH QKLSPKPEEFALEVLWLVLHQFVIAMDKLNDETKQIERSLGKAAKNTQLYQLMAMQKGLV HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCE FFDAALDHSGTLLKALRDGERFFNTNGYLRRLHDVEVEVVEAQTMVRITEKLLTQYSTAV EEEEHHCCCCHHHHHHHCCHHHCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHH SAIVSNNLNLIMKVLTSITIILTIPTIVGGIYGMNVRLPFANAYWAFWWLIGGTAILCGL HHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHH AAWWLWRQDYF HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]