| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494269
Identifier: 116494269
GI number: 116494269
Start: 725049
End: 725348
Strand: Direct
Name: 116494269
Synonym: LSEI_0724
Alternate gene names: NA
Gene position: 725049-725348 (Clockwise)
Preceding gene: 116494265
Following gene: 116494271
Centisome position: 25.04
GC content: 48.67
Gene sequence:
>300_bases ATGGCAGAACAATCGGAGAACACCGTGACGCGAACACAAAAGCAAGAAGGTGCGGATGCGATTATGGATAAGGGTTACGT CACTGAGCGGGATATTCCGGAAATGATGAGCAAAACATGGAGCGAACAACTTCTTGATGCTGTTAATGATGAGTTGCGCT TGCGCACGGTGACCAATCGCACCGTGTTACAGCAATTTCACTATTACATGGGCAACGGCACGATCATTTATGATCCGGGT CAGCTGAACTCTGAAGGGGCCAAGATCGCCTTACAGCACGCCTTAGGTTTCCGCAAATAA
Upstream 100 bases:
>100_bases CAAGGCATGTGTCTGGGTGTGATAGAATCAAGAAGGCGACAGACCGCGGATAAGCGGCTCTAAAAATTTTCTGAAAACAA GCAGATTAAGGAGGATTACG
Downstream 100 bases:
>100_bases AGCTAAACTGCTTGTGATGGTTATCGGCAGTTTAGCTTTTTTGATGGTCGTGAGCGGCATTAAGCAAACGGGCCAGTCAA AACAACCTTGCCCACTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MAEQSENTVTRTQKQEGADAIMDKGYVTERDIPEMMSKTWSEQLLDAVNDELRLRTVTNRTVLQQFHYYMGNGTIIYDPG QLNSEGAKIALQHALGFRK
Sequences:
>Translated_99_residues MAEQSENTVTRTQKQEGADAIMDKGYVTERDIPEMMSKTWSEQLLDAVNDELRLRTVTNRTVLQQFHYYMGNGTIIYDPG QLNSEGAKIALQHALGFRK >Mature_98_residues AEQSENTVTRTQKQEGADAIMDKGYVTERDIPEMMSKTWSEQLLDAVNDELRLRTVTNRTVLQQFHYYMGNGTIIYDPGQ LNSEGAKIALQHALGFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11295; Mature: 11164
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSENTVTRTQKQEGADAIMDKGYVTERDIPEMMSKTWSEQLLDAVNDELRLRTVTNR CCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHH TVLQQFHYYMGNGTIIYDPGQLNSEGAKIALQHALGFRK HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure AEQSENTVTRTQKQEGADAIMDKGYVTERDIPEMMSKTWSEQLLDAVNDELRLRTVTNR CCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHH TVLQQFHYYMGNGTIIYDPGQLNSEGAKIALQHALGFRK HHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA