Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494242

Identifier: 116494242

GI number: 116494242

Start: 693958

End: 694590

Strand: Direct

Name: 116494242

Synonym: LSEI_0694

Alternate gene names: NA

Gene position: 693958-694590 (Clockwise)

Preceding gene: 116494241

Following gene: 116494246

Centisome position: 23.97

GC content: 48.66

Gene sequence:

>633_bases
ATGCACAAGTTTGATTGGCGGGAAGTTGAACGTGACGAGTATTCGCGGTCTGAGGAACCTAGTTTTGTGAAGTTGACAAC
GCGCAGCTATATCACAGCGATGGGGGTGGCACCAGATCGGGTGACGGATCAAGCCTTCACGTCACTGGCAGCAGCGGTCA
CCCAAATTGCTGAGCGGATCAGCGAAGGACCAGATGCTGGCATTGATATTCCGAACTTTAAAGCTTACCATCCCTATCCA
TTGCAGGCGGTTTGGTCAGGGGGCGATAAAATCAGTAAGCGCCACATTTTTCGACTGTGGTTGAAGCAACCGTTGTTTAT
TCATGAAGACCAGTTTGAGGCTGCACTGACACAGCTGCATTTTGAACCAGCCATTGCCCAGCAGCTTCACTTAGAACAGT
TGGCAGAAGGGTTTGAAATTCAAAGCTTTAATTCAACACCACTGACGGATGAAGCACCTGCGATTGCGCGTATTCAAACA
GTGATCAATCGCGACCATCTCGTTCCTAAATTTGATGATCGGCATCGCGAGGTTTATTTGGAAGGCTATCAAGGAGAAGT
GCCGGTACTTTACCGGGTGCCGCTTGACGAAAACTTCGGTGAAGTTGGCGATGAGCAGGTTGCATATAATTAA

Upstream 100 bases:

>100_bases
CAACGCTTAACATGCGTGCTTAGAAACTGGCCTATACGCGATTTAAGGCTGAAGTCGTCGCCTTTTTGGGCTGGAGAACA
CGTTGAAGGAGGAAAAAATG

Downstream 100 bases:

>100_bases
TCCGAATCAATGACGCCATGAAAAAGCGATCAGCTCTTTTTAAAATGAGCTGATCGCTTTTGTTGTCTTAATTAGAATTG
TGGGTAGACAATCTTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP
LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT
VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN

Sequences:

>Translated_210_residues
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP
LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT
VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
>Mature_210_residues
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP
LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT
VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24100; Mature: 24100

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERI
CCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLH
HCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH
FEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYL
CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
EGYQGEVPVLYRVPLDENFGEVGDEQVAYN
ECCCCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERI
CCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLH
HCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH
FEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYL
CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
EGYQGEVPVLYRVPLDENFGEVGDEQVAYN
ECCCCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA