| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494242
Identifier: 116494242
GI number: 116494242
Start: 693958
End: 694590
Strand: Direct
Name: 116494242
Synonym: LSEI_0694
Alternate gene names: NA
Gene position: 693958-694590 (Clockwise)
Preceding gene: 116494241
Following gene: 116494246
Centisome position: 23.97
GC content: 48.66
Gene sequence:
>633_bases ATGCACAAGTTTGATTGGCGGGAAGTTGAACGTGACGAGTATTCGCGGTCTGAGGAACCTAGTTTTGTGAAGTTGACAAC GCGCAGCTATATCACAGCGATGGGGGTGGCACCAGATCGGGTGACGGATCAAGCCTTCACGTCACTGGCAGCAGCGGTCA CCCAAATTGCTGAGCGGATCAGCGAAGGACCAGATGCTGGCATTGATATTCCGAACTTTAAAGCTTACCATCCCTATCCA TTGCAGGCGGTTTGGTCAGGGGGCGATAAAATCAGTAAGCGCCACATTTTTCGACTGTGGTTGAAGCAACCGTTGTTTAT TCATGAAGACCAGTTTGAGGCTGCACTGACACAGCTGCATTTTGAACCAGCCATTGCCCAGCAGCTTCACTTAGAACAGT TGGCAGAAGGGTTTGAAATTCAAAGCTTTAATTCAACACCACTGACGGATGAAGCACCTGCGATTGCGCGTATTCAAACA GTGATCAATCGCGACCATCTCGTTCCTAAATTTGATGATCGGCATCGCGAGGTTTATTTGGAAGGCTATCAAGGAGAAGT GCCGGTACTTTACCGGGTGCCGCTTGACGAAAACTTCGGTGAAGTTGGCGATGAGCAGGTTGCATATAATTAA
Upstream 100 bases:
>100_bases CAACGCTTAACATGCGTGCTTAGAAACTGGCCTATACGCGATTTAAGGCTGAAGTCGTCGCCTTTTTGGGCTGGAGAACA CGTTGAAGGAGGAAAAAATG
Downstream 100 bases:
>100_bases TCCGAATCAATGACGCCATGAAAAAGCGATCAGCTCTTTTTAAAATGAGCTGATCGCTTTTGTTGTCTTAATTAGAATTG TGGGTAGACAATCTTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
Sequences:
>Translated_210_residues MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN >Mature_210_residues MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYP LQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQT VINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24100; Mature: 24100
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERI CCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLH HCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH FEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYL CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE EGYQGEVPVLYRVPLDENFGEVGDEQVAYN ECCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERI CCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLH HCCCCCCCCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH FEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYL CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE EGYQGEVPVLYRVPLDENFGEVGDEQVAYN ECCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA