| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494220
Identifier: 116494220
GI number: 116494220
Start: 675794
End: 676102
Strand: Direct
Name: 116494220
Synonym: LSEI_0672
Alternate gene names: NA
Gene position: 675794-676102 (Clockwise)
Preceding gene: 116494219
Following gene: 116494221
Centisome position: 23.34
GC content: 41.75
Gene sequence:
>309_bases ATGACAGTCAAGATTTTGGCAGCTTGTGGTGCGGGTGTTAATTCTAGTCACCAGATCAAAGATGCAATTGAAAAGGAATT TAAGAAGCGCGGCTATAGCGTTCAGGCAGATGCCGTGATGGTCAAGGATGTTAATGAAGACATGATGAAGAATTATGACA TTTTCACTCCAATTGCAAAGACCGATTTAGGCTTTACACCGGCAATTCCCGTTATTAACGCAGGTCCAATCTTGTATCGG ATGCCAGCAATGGCGAAACCTGTTTACGACAAAATTGAAGGCGTTATCAAGAAGGAAAATCTGAAATAG
Upstream 100 bases:
>100_bases CTTCTGCTGAAACATTAGCTAAATTATTCGGAGCAGACGATGCGGCAACAATTTACAACGTTTTAGCAACCAGTTTTAAA AAATAAGGAGGAAGTTTGTT
Downstream 100 bases:
>100_bases TCTCATGGTCTGATGGCGATGAACCGTCAGATACATATAAGGAGTGAGAAAATTCATGCAAACCATTATTGATTTGGCCA ATGCGGTCTTCAAGCCAGTT
Product: phosphotransferase system, galactitol-specific IIB component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System Galacitol-Specific Transporter Subunit IIB; PTS System Sugar Transporter Subunit IIB; Phosphotransferase System Galacitol-Specific IIB Component; PTS System Mannitol/Fructose-Specific IIB Component; PTS System Galactose-Specific IIB Component; Phosphotransferase System Galacitol-Specific IIb Component; PTS System Galactitol-Specific IIB Component
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTVKILAACGAGVNSSHQIKDAIEKEFKKRGYSVQADAVMVKDVNEDMMKNYDIFTPIAKTDLGFTPAIPVINAGPILYR MPAMAKPVYDKIEGVIKKENLK
Sequences:
>Translated_102_residues MTVKILAACGAGVNSSHQIKDAIEKEFKKRGYSVQADAVMVKDVNEDMMKNYDIFTPIAKTDLGFTPAIPVINAGPILYR MPAMAKPVYDKIEGVIKKENLK >Mature_101_residues TVKILAACGAGVNSSHQIKDAIEKEFKKRGYSVQADAVMVKDVNEDMMKNYDIFTPIAKTDLGFTPAIPVINAGPILYRM PAMAKPVYDKIEGVIKKENLK
Specific function: Unknown
COG id: COG3414
COG function: function code G; Phosphotransferase system, galactitol-specific IIB component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 11245; Mature: 11114
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKILAACGAGVNSSHQIKDAIEKEFKKRGYSVQADAVMVKDVNEDMMKNYDIFTPIAK CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCCCCC TDLGFTPAIPVINAGPILYRMPAMAKPVYDKIEGVIKKENLK CCCCCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TVKILAACGAGVNSSHQIKDAIEKEFKKRGYSVQADAVMVKDVNEDMMKNYDIFTPIAK CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCCCCC TDLGFTPAIPVINAGPILYRMPAMAKPVYDKIEGVIKKENLK CCCCCCCCCCCEECCCCEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA