Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116494157

Identifier: 116494157

GI number: 116494157

Start: 596958

End: 597626

Strand: Direct

Name: 116494157

Synonym: LSEI_0605

Alternate gene names: NA

Gene position: 596958-597626 (Clockwise)

Preceding gene: 116494155

Following gene: 116494158

Centisome position: 20.62

GC content: 46.94

Gene sequence:

>669_bases
ATGAAAAAAGTTAACTATATTGCAGCCGGAATTTCCGCATTAACAATTGCTGGGCTCCTGTTGCCAACTGGTCAGGTTTT
CGCTGCTGATATTAACAAAACATCTGTAGCTGAAGTTAACATTCAGGGTGGACCAATTACCTTAGATCAAGTGCCCGATC
TAAACTTTGGAACTATTGAGATTGATAAGTTAATTGCTGGTGAGGTTAGCCAACCGCTTGTTGATAATACCGTTCCAGTT
GGTCCCGTTAAAACTGCCGCTGATCCCAAGGACGGTAATGCAACCGGTGATTTAAGCGTCACCGATAACCGCGGTACGAA
CGTTGGTTGGGAGCTGACAGCGCAACTTGGCGATATGAAAAATGCAGGTGGTAAGGCATTGGCGGGTTCAATGATCCTTA
AAGGGACCGATATTAAGACTGATAATGTAAGCCTTAATGCGATTAACCCAGGCGCCGCTCTTCCAGAATTAGTCATTGGC
GGCGCTGCAGTGTCTGTCTGGAAAGCTAATGCTGCCACTGGCACAGACGATGGTCAGGGACAGGGGAAAAACACTGCTGT
CATCAAAAATGCGGGTGGCACGACCCTTAAACTGAAACAGAATTTGACACCAACAGCAGGACAATACCAAGCGGCCATCA
CCTGGACTTTAGCCGACGCACCTAAGTAA

Upstream 100 bases:

>100_bases
CGCCAGCTCTAATTCATTGATTCTTCTCGCTCAATCCTGTATTATGAGTAGTATAGAGAGAGATAAATGAATTTCAATAA
CGATATGGAGGCAAAAAGTG

Downstream 100 bases:

>100_bases
TCTATGGCACCTAAACTAAGGGGCAGCGGTCATTCGCTGCCCTTTTCATGACTGTGGGGGCGGAACCATGAAAAAGAAAA
TCATTTTCAGCCTGTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKVNYIAAGISALTIAGLLLPTGQVFAADINKTSVAEVNIQGGPITLDQVPDLNFGTIEIDKLIAGEVSQPLVDNTVPV
GPVKTAADPKDGNATGDLSVTDNRGTNVGWELTAQLGDMKNAGGKALAGSMILKGTDIKTDNVSLNAINPGAALPELVIG
GAAVSVWKANAATGTDDGQGQGKNTAVIKNAGGTTLKLKQNLTPTAGQYQAAITWTLADAPK

Sequences:

>Translated_222_residues
MKKVNYIAAGISALTIAGLLLPTGQVFAADINKTSVAEVNIQGGPITLDQVPDLNFGTIEIDKLIAGEVSQPLVDNTVPV
GPVKTAADPKDGNATGDLSVTDNRGTNVGWELTAQLGDMKNAGGKALAGSMILKGTDIKTDNVSLNAINPGAALPELVIG
GAAVSVWKANAATGTDDGQGQGKNTAVIKNAGGTTLKLKQNLTPTAGQYQAAITWTLADAPK
>Mature_222_residues
MKKVNYIAAGISALTIAGLLLPTGQVFAADINKTSVAEVNIQGGPITLDQVPDLNFGTIEIDKLIAGEVSQPLVDNTVPV
GPVKTAADPKDGNATGDLSVTDNRGTNVGWELTAQLGDMKNAGGKALAGSMILKGTDIKTDNVSLNAINPGAALPELVIG
GAAVSVWKANAATGTDDGQGQGKNTAVIKNAGGTTLKLKQNLTPTAGQYQAAITWTLADAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22498; Mature: 22498

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNYIAAGISALTIAGLLLPTGQVFAADINKTSVAEVNIQGGPITLDQVPDLNFGTIE
CCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEE
IDKLIAGEVSQPLVDNTVPVGPVKTAADPKDGNATGDLSVTDNRGTNVGWELTAQLGDMK
ECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC
NAGGKALAGSMILKGTDIKTDNVSLNAINPGAALPELVIGGAAVSVWKANAATGTDDGQG
CCCCCEEECEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCCC
QGKNTAVIKNAGGTTLKLKQNLTPTAGQYQAAITWTLADAPK
CCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MKKVNYIAAGISALTIAGLLLPTGQVFAADINKTSVAEVNIQGGPITLDQVPDLNFGTIE
CCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEECCCCCCCCCCEEE
IDKLIAGEVSQPLVDNTVPVGPVKTAADPKDGNATGDLSVTDNRGTNVGWELTAQLGDMK
ECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC
NAGGKALAGSMILKGTDIKTDNVSLNAINPGAALPELVIGGAAVSVWKANAATGTDDGQG
CCCCCEEECEEEEECCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCCC
QGKNTAVIKNAGGTTLKLKQNLTPTAGQYQAAITWTLADAPK
CCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA