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The map label for this gene is sdc [H]

Identifier: 116494110

GI number: 116494110

Start: 545877

End: 546758

Strand: Direct

Name: sdc [H]

Synonym: LSEI_0553

Alternate gene names: 116494110

Gene position: 545877-546758 (Clockwise)

Preceding gene: 116494107

Following gene: 116494111

Centisome position: 18.85

GC content: 43.76

Gene sequence:

>882_bases
ATGAAATTAACAGCAAAATGGCTTTTAGCCCTCAGTACAGTATTAGGAATTAGTATCAGTGGTTGTTCAGCAGTTCAGGG
TTCGAATTCAGGTCAGTCAAATACAACCAAATCTGCACCATCCTACGCTGTATCAACGAGTACCACTGAGGACGCGCAGG
CAAACAGTGAGCTTGCCAACTTGCCATTTGATTTGGCAAAGTATCCGCAAAACTACACAACGGTTAATCAGAATGTCCCA
ATTTTTGAAAATGGTTTTAAGCAAACGGTAGCTGCCGCGCAAAAAGCAAAAACAACACGCGCTCAAACTTACTTTGACAG
CTTAGATGACTTGGGTAGAACACAAACGGTCTCTGCCATTATTACTTACGGTATGATGCACAGTCACGCAAGCTCTGTGC
GCAAGCGACCAGCCTTTCCTAAAACCACGAAGGTCTCCGGTGAGTACGCTGATGGCGTGTATAACAAGAACCTACAACAA
TGGTTTGGCCGCAGCGACAATAACCGAATGGTCCAACTTAACGGTTATCGAGGTTATCTGTATAATAAAAGCCACCTGTT
AACGTGGTCACTAGGTGGCAATATGCAGACTCATAATGTTATTCTTGGCACTCGTGCTCAAAATGTTGGCACTAATGACC
AACGGAATCCCGGTGGTATGGCTTACACGGAAACTCTGACGCGCAATTATCTTAGCTCACACCAAGACGATGCTGTCGCT
TATCAAGTCATTCCAGTATATGTTGGTCAAGAGCTTGTGCCGCGTGGTACACATGTTCTGGTGCAGTCCATTGATAACCC
AAACAAATTTCACTTAAATGTCTGGGTCTTTAATACGCAAGCAGGAAGAACAATTAACTACAATAATGGTTCATTTCAAT
AG

Upstream 100 bases:

>100_bases
TTCGGGTCGGCCAAGAGCCCGCCGCCCCTACGCAAACTAGGCCTTACTGAGCGTTACTTGCTCAGCAAGGCCACCACGAT
GAATCAGAAAGGAATTCTCT

Downstream 100 bases:

>100_bases
AGAGGAGCCTGATTTATTGGATCGTGATTCCGTTCGTAAAATAGTCCAGAACTATATCGACAAGAACAAACTGAGTAACC
CAGAATTTTCCAGAAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: DNase; Streptodornase [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKLTAKWLLALSTVLGISISGCSAVQGSNSGQSNTTKSAPSYAVSTSTTEDAQANSELANLPFDLAKYPQNYTTVNQNVP
IFENGFKQTVAAAQKAKTTRAQTYFDSLDDLGRTQTVSAIITYGMMHSHASSVRKRPAFPKTTKVSGEYADGVYNKNLQQ
WFGRSDNNRMVQLNGYRGYLYNKSHLLTWSLGGNMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVA
YQVIPVYVGQELVPRGTHVLVQSIDNPNKFHLNVWVFNTQAGRTINYNNGSFQ

Sequences:

>Translated_293_residues
MKLTAKWLLALSTVLGISISGCSAVQGSNSGQSNTTKSAPSYAVSTSTTEDAQANSELANLPFDLAKYPQNYTTVNQNVP
IFENGFKQTVAAAQKAKTTRAQTYFDSLDDLGRTQTVSAIITYGMMHSHASSVRKRPAFPKTTKVSGEYADGVYNKNLQQ
WFGRSDNNRMVQLNGYRGYLYNKSHLLTWSLGGNMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVA
YQVIPVYVGQELVPRGTHVLVQSIDNPNKFHLNVWVFNTQAGRTINYNNGSFQ
>Mature_293_residues
MKLTAKWLLALSTVLGISISGCSAVQGSNSGQSNTTKSAPSYAVSTSTTEDAQANSELANLPFDLAKYPQNYTTVNQNVP
IFENGFKQTVAAAQKAKTTRAQTYFDSLDDLGRTQTVSAIITYGMMHSHASSVRKRPAFPKTTKVSGEYADGVYNKNLQQ
WFGRSDNNRMVQLNGYRGYLYNKSHLLTWSLGGNMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVA
YQVIPVYVGQELVPRGTHVLVQSIDNPNKFHLNVWVFNTQAGRTINYNNGSFQ

Specific function: May have a role in S.equisimilis virulence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001604 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: =3.1.21.1 [H]

Molecular weight: Translated: 32296; Mature: 32296

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTAKWLLALSTVLGISISGCSAVQGSNSGQSNTTKSAPSYAVSTSTTEDAQANSELAN
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCHHHC
LPFDLAKYPQNYTTVNQNVPIFENGFKQTVAAAQKAKTTRAQTYFDSLDDLGRTQTVSAI
CCHHHHHCCCCCEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ITYGMMHSHASSVRKRPAFPKTTKVSGEYADGVYNKNLQQWFGRSDNNRMVQLNGYRGYL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCCEEEEECCEEEE
YNKSHLLTWSLGGNMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVA
ECCCEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
YQVIPVYVGQELVPRGTHVLVQSIDNPNKFHLNVWVFNTQAGRTINYNNGSFQ
EEEEEEECCHHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MKLTAKWLLALSTVLGISISGCSAVQGSNSGQSNTTKSAPSYAVSTSTTEDAQANSELAN
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCHHHC
LPFDLAKYPQNYTTVNQNVPIFENGFKQTVAAAQKAKTTRAQTYFDSLDDLGRTQTVSAI
CCHHHHHCCCCCEEECCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ITYGMMHSHASSVRKRPAFPKTTKVSGEYADGVYNKNLQQWFGRSDNNRMVQLNGYRGYL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCCEEEEECCEEEE
YNKSHLLTWSLGGNMQTHNVILGTRAQNVGTNDQRNPGGMAYTETLTRNYLSSHQDDAVA
ECCCEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
YQVIPVYVGQELVPRGTHVLVQSIDNPNKFHLNVWVFNTQAGRTINYNNGSFQ
EEEEEEECCHHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1937032 [H]