| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494106
Identifier: 116494106
GI number: 116494106
Start: 544589
End: 544768
Strand: Direct
Name: 116494106
Synonym: LSEI_0549
Alternate gene names: NA
Gene position: 544589-544768 (Clockwise)
Preceding gene: 116494105
Following gene: 116494107
Centisome position: 18.81
GC content: 60.56
Gene sequence:
>180_bases ATGCCCTACCTGCTGGACCTCAGTCGAGCTGGCGACGAGAACGACTGGTTTTTGCCGTTCCGTTGTATCATGTTGCCGAT ATCGGATCTAATCCTCGCAGCAGGCAGGTGCCTGAAGCGCGTGGGCGGGGCAGGCGCCCCACGCTTCTCGGCCTTGGCCG AAGAGGCTTTTTTGCGGTAG
Upstream 100 bases:
>100_bases CTGTAGACAAAGAAGATGAACAGAAATATCAACAAACTCAGCCGGTCAAACCCCAGCAGCATAAAAAACAACGTGCAGCA GGACCAGAGCAAAGTATGTA
Downstream 100 bases:
>100_bases CAAGATTGCTGTATGCCTTGCGCCTCTAGGAACAAAGCCAATTATATGCTATACTAAACATAGCAGAAAAGTTAAAGGCG GTGGCGACTTCCGTAGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MPYLLDLSRAGDENDWFLPFRCIMLPISDLILAAGRCLKRVGGAGAPRFSALAEEAFLR
Sequences:
>Translated_59_residues MPYLLDLSRAGDENDWFLPFRCIMLPISDLILAAGRCLKRVGGAGAPRFSALAEEAFLR >Mature_58_residues PYLLDLSRAGDENDWFLPFRCIMLPISDLILAAGRCLKRVGGAGAPRFSALAEEAFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6526; Mature: 6395
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLLDLSRAGDENDWFLPFRCIMLPISDLILAAGRCLKRVGGAGAPRFSALAEEAFLR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PYLLDLSRAGDENDWFLPFRCIMLPISDLILAAGRCLKRVGGAGAPRFSALAEEAFLR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA