Click here to switch to the map view.

The map label for this gene is 116494100

Identifier: 116494100

GI number: 116494100

Start: 539634

End: 539813

Strand: Direct

Name: 116494100

Synonym: LSEI_0543

Alternate gene names: NA

Gene position: 539634-539813 (Clockwise)

Preceding gene: 116494099

Following gene: 116494101

Centisome position: 18.64

GC content: 42.22

Gene sequence:

>180_bases
ATGGATAAACAAAACGAAACACGTCGAGTCATGATGACCTTGAGCGATCAGGCAATCGCAAAGTTGGATCACCTTGTAGC
TGAAAAGCAACGGGAACTAAATCAAAATCCGGAGCTTGCTAAGTACAACCTAAGGCTCAACAAATCAAATATTTTGGAAG
CGTGGCTATCAAAGCAGTGA

Upstream 100 bases:

>100_bases
GCAACTGTTTACCAAAAATCGTCCGGTAACGTGACGCGATTTTAACGCCGTGTGGGTTTGCCAGGCGACAGTTTGTCATC
GCTATGAAGGAGGCTTTGAG

Downstream 100 bases:

>100_bases
CGTTTTCGTTGGCGTCATATTTTCAAAGGAGGAAAAAAGAATGGCGGAATTGAAAGTGAGAGATTTATCTGAGCAAGATT
TGGCGGGTATTGAATCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Replication Protein; Plasmid Replication Protein

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ

Sequences:

>Translated_59_residues
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ
>Mature_59_residues
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6967; Mature: 6967

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA