| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494078
Identifier: 116494078
GI number: 116494078
Start: 520453
End: 520788
Strand: Direct
Name: 116494078
Synonym: LSEI_0520
Alternate gene names: NA
Gene position: 520453-520788 (Clockwise)
Preceding gene: 116494077
Following gene: 116494079
Centisome position: 17.98
GC content: 47.62
Gene sequence:
>336_bases ATGAACTCAACTAATGCGATGAAGCGAGTCGGGTACGGATATGTAAGCCACACAGAGCAAGCAATCATTGAGAAACTATC GAGAGAAGAGAAACACATGCAAGCAATCATCTACACAAAGCCACACTGCCAAAAGTGTCGGCGAACAGTATTCAAGCTGT CACGAGTCATGCCAGTGCAAACCATCACAGCAGACGCGGACGACTACGAGCGGTTCCGCAAGCTAGGCTATCGTTCAATG CCAGTCGTAACAATCTACGAAGCAGACGGCACACACGATGAATGGTGCGATTTAAGGGTTGATAAGATCAAGCAGTACAC GGAGGGAAACATATGA
Upstream 100 bases:
>100_bases GCAAAGCCAAATGATCCCTATGAGATTAAGAATGGCTTCACCACGGGCAAACATCTGCTGTATGCGTTCGTTTATGACGA CACGCGATTGAGGTGTACTT
Downstream 100 bases:
>100_bases ACGGAAAATTAATTTACTTGGTTGATAAGGATGAGTATATATTCATAACAACTATTAATTGGCAAGAATGTCAATGGCTC CTATGCTGTAATTACGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQTITADADDYERFRKLGYRSM PVVTIYEADGTHDEWCDLRVDKIKQYTEGNI
Sequences:
>Translated_111_residues MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQTITADADDYERFRKLGYRSM PVVTIYEADGTHDEWCDLRVDKIKQYTEGNI >Mature_111_residues MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQTITADADDYERFRKLGYRSM PVVTIYEADGTHDEWCDLRVDKIKQYTEGNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13035; Mature: 13035
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQ CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCHH TITADADDYERFRKLGYRSMPVVTIYEADGTHDEWCDLRVDKIKQYTEGNI HEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSTNAMKRVGYGYVSHTEQAIIEKLSREEKHMQAIIYTKPHCQKCRRTVFKLSRVMPVQ CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCHH TITADADDYERFRKLGYRSMPVVTIYEADGTHDEWCDLRVDKIKQYTEGNI HEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA